Showing : maketxdbfromgff • reset
2
votes
2
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1.5k
views
Problem with MakeTxDbFromGFF
makeTxDbFromGff
2.0 years ago stacy.genovese • 0
3
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4
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3.6k
views
Saving and retrieving TxDB object
makeTxDBFromGFF EISA
updated 4.6 years ago by 68k • written 4.6 years ago by • 0
0
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0
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1.8k
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error with makeTxDbFromGFF
genomicfeatures gff custom genome makeTxDbFromGFF makeTxDbFromGRanges
5.9 years ago xvazquezc • 0
0
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1
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1.5k
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Error in .merge_transcript_parts(transcripts)
maketxdbfromgff
6.3 years ago csijcs • 0
0
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2
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2.7k
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makeTxDbFromGFF errors too many NAs and make.splicings
maketxdbfromgff limma
updated 6.4 years ago by 16k • written 6.5 years ago by ▴ 20
0
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1
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1.7k
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makeTxDbFromGFF error "stop codons that cannot be mapped to an exon"
genomicfeatures txdb maketxdbfromgff
updated 6.7 years ago by ▴ 50 • written 6.7 years ago by • 0
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0
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1.1k
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Error using the makeTxDbFromGFF
maketxdbfromgff
7.1 years ago bright602 • 0
0
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1
reply
4.3k
views
create a txdb using makeTxDbFromGFF
bioconductor txdb maketxdbfromgff
7.3 years ago Nader.Aryamanesh • 0
0
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3
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4.2k
views
makeTxDbFromGFF Error: subscript contains NAs
genomicfeatures granges maketxdbfromgff
updated 7.5 years ago by 16k • written 7.7 years ago by • 0
1
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2
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1.3k
views
Error while using GenomicFeatures package
genomicfeatures maketxdbfromgff
updated 8.1 years ago by 16k • written 8.1 years ago by ▴ 10
3
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2
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2.5k
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makeTxDbFromGFF drops genes which have multiple chromosome locations. (with iGenome GTF)
genomicfeatures gtf maketxdbfromgff iGenome
updated 8.3 years ago by 25k • written 8.3 years ago by ▴ 20
1
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2
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1.6k
views
mRNA start used instead of gene start in makeTxDbFromGFF
maketxdbfromgff genomicfeatures
updated 8.9 years ago by 16k • written 8.9 years ago by ▴ 80
4
votes
2
replies
1.6k
views
distinguish DataSource from Provider and ProviderVersion in makeTxDbPackage
genomicfeatures txdb maketxdbfromgff metadata
updated 8.9 years ago by ★ 6.8k • written 8.9 years ago by ▴ 80
0
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5
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2.0k
views
makeTxDbFromGFF returns empty object
genomicfeatures txdb maketxdbfromgff
8.9 years ago TimothéeFlutre ▴ 80
0
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0
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1.1k
views
Annotation missing when using makeTxDbFromGFF
makeTxDbFromGFF
9.1 years ago Udi Landau ▴ 30
8
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7
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4.1k
views
Generating a proper TxDb instance from NCBI GFF Annotations File
ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb
updated 9.2 years ago by 16k • written 9.2 years ago by ▴ 10
0
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7
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2.2k
views
Get wrong tx_type when using GenomicFeatures::makeTxDbFromGTF
genomicfeatures maketxdbfromgff tx_type gtf
updated 9.3 years ago by 16k • written 9.3 years ago by • 0
0
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0
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1.3k
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Get wrong tx_type when using GenomicFeatures::makeTxDbFromGTF
genomicfeatures maketxdbfromgff tx_type gtf
9.3 years ago Karolin Wiedemann • 0
0
votes
4
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2.3k
views
MakeTxDbFromGFF creates empty object
maketxdbfromgff
updated 9.3 years ago by 16k • written 9.3 years ago by • 0
0
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7
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2.7k
views
makeTxDbFromGFF yields an empty TxDb
annotation maketxdbfromgff genomicfeatures
9.4 years ago José Luis Lavín ▴ 10
0
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2
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2.5k
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makeTxDbpackage after makeTxDbfromGFF --> Error in spc[[2]] : subscript out of bounds
gtf TxDb maketxdbfromgff
updated 9.7 years ago by 16k • written 9.7 years ago by • 0
0
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2
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2.3k
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makeTxDbFromGFF not capturing/displaying 'gene' records from GFF3 file.
genomicfeatures makeTxDbFromGFF
updated 9.9 years ago by 16k • written 9.9 years ago by • 0
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