Bioconductor Mirna-seq

Showing : mirna-seq • reset

votes

replies

7.1k

views

deseq2 rnaseq mirna-seq differential gene expression

written 7.8 years ago by klalit1803 ▴ 10

votes

replies

1.5k

views

mirna-seq limma

updated 7.3 years ago by Gordon Smyth 53k • written 7.3 years ago by Michael Stone • 0

votes

replies

1.4k

views

mirna-seq

updated 7.5 years ago by Levi Waldron ★ 1.1k • written 7.5 years ago by ndiayediop2 • 0

vote

replies

1.2k

views

mirna-seq

7.6 years ago • updated 7.5 years ago ndiayediop2 • 0

votes

replies

3.6k

views

r survival analysis rtcga tcgabiolinks mirna-seq

7.5 years ago atakanekiz ▴ 30

votes

1.0k

views

deseq2 differentially expression mirna-seq mirna target prediction

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by Björn • 0

votes

replies

1.4k

views

DESeq2 mirna-seq small RNA-seq

updated 8.0 years ago by Michael Love 43k • written 8.0 years ago by CandiceChuDVM ▴ 40

vote

replies

5.1k

views

deseq2 mirna-seq experimental design differential expression

updated 8.6 years ago by Gavin Kelly ▴ 690 • written 8.6 years ago by francesco.gandolfi ▴ 10

votes

replies

5.6k

views

miRNA mirna-seq

updated 8.8 years ago by Jon Bråte ▴ 270 • written 8.8 years ago by just • 0

9 results • Page 1 of 1

Recent ...

Replies

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by victor04052024 • 0

The information is interesting, and your writing is excellent. I will provide you a link to my website [Baseball bros](https://baseball-gam…

Votes

Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Awards • All