Showing : mirna-seq • reset
2
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9
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how to control age and gender effect in expression data using DESeq2
deseq2 rnaseq mirna-seq differential gene expression
written 6.8 years ago by ▴ 10
2
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3
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1.2k
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Limma: Differential expression for micro RNA sequence data
mirna-seq limma
updated 6.3 years ago by 52k • written 6.3 years ago by • 0
0
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2
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1.1k
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help for package DESeq2 in R
mirna-seq
updated 6.5 years ago by ★ 1.1k • written 6.5 years ago by • 0
1
vote
2
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901
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help for deseq2
mirna-seq
6.6 years ago • updated 6.5 years ago ndiayediop2 • 0
6
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7
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2.9k
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Differences between RTCGA and TCGAbiolinks data
r survival analysis rtcga tcgabiolinks mirna-seq
6.5 years ago atakanekiz ▴ 30
0
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1
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834
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How to find non-DE miRNAs using Deseq2 ?
deseq2 differentially expression mirna-seq mirna target prediction
updated 6.6 years ago by 43k • written 6.6 years ago by • 0
0
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3
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1.2k
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DESeq2: would 'contrast' work for serial experiments?
DESeq2 mirna-seq small RNA-seq
updated 6.9 years ago by 43k • written 6.9 years ago by ▴ 40
1
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2
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4.7k
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Multiple comparisons for DE analysis with DESeq2
deseq2 mirna-seq experimental design differential expression
updated 7.6 years ago by ▴ 690 • written 7.6 years ago by ▴ 10
0
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4
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4.9k
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miRNA-seq data analysis
miRNA mirna-seq
updated 7.8 years ago by ▴ 260 • written 7.8 years ago by • 0
9 results • Page 1 of 1
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Answer: Limma - using both array and spot weights in lmFit by Gordon Smyth 52k
Was answered here: https://support.bioconductor.org/p/17028/
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by daldabrown9 • 0
For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/
Answer: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k
Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…
Comment: miRTarRnaseq library by mercedeh.movassagh ▴ 20
Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…
Comment: Help using rtracklayer for gene ID extraction by James W. MacDonald 67k
Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…
Votes
Answer: Fold change calculation in Diffbind vs. DESEQ2?
Fold change calculation in Diffbind vs. DESEQ2?
FeatureCounts Output Counts at Exon Level Using Default Settings, want gene level
Answer: FeatureCounts Output Counts at Exon Level Using Default Settings, want gene leve
Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?
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