Bioconductor Mouse

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431

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annotation SingleR mouse SingleCellData scRNAseq

11 months ago Muhammad • 0

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998

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TFutils mouse gene convert

4.6 years ago nicocillari • 0

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2.3k

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RNAseq Affymetrix Mouse

updated 5.2 years ago by Guido Hooiveld ★ 4.1k • written 5.2 years ago by olrema • 0

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AnnotationHub Ensembl Mouse AnnotationHub Ensembl

6.1 years ago dmgatti ▴ 10

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deseq2 mouse rnaseq

8.1 years ago Emilie • 0

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Annotation mouse UNIPROT

updated 8.3 years ago by Mike Smith ★ 6.6k • written 8.3 years ago by julie.chevalier • 0

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human mouse ensembl annotationdbi homologue

8.6 years ago Keith Hughitt ▴ 180

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bead chip Annotation Mouse Lumi probeID2nuID

updated 9.5 years ago by Andy Lynch ▴ 120 • written 9.5 years ago by smt8n • 0

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biomart ensembl release82 variation mouse News

10.3 years ago Thomas Maurel ▴ 800

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3.7k

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human mouse GRCh38 biomart Ensembl News

updated 10.5 years ago by Sonali Arora ▴ 390 • written 10.5 years ago by Thomas Maurel ▴ 800

10 results • Page 1 of 1

Recent ...

Replies

Answer: Clarification on counting in Rsubread (featureCounts) by Frances Turner • 0

You should look at the summary files produced by feature counts. This gives a breakdown of what happened to reads that were not assigned. Y…

Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Votes

C: RNA-Seq analysis with Limma/edgeR, time course experiment, aberrant results

A: Conversion from counts to FPKM

Answer: Incosistencies in buildSNNGraph() function

Answer: Where do the filename come from in the LOLA datasets?

Awards • All

Great Question to fl ▴ 20

Popular Question to Lluís Revilla Sancho ▴ 760