Bioconductor PcaMethods

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pcaMethods pca

updated 11 months ago by James W. MacDonald 67k • written 11 months ago by yousavdj • 0

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pcaMethods

11 months ago yousavdj • 0

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PCAtools pcaExplorer pcaMethods

updated 2.6 years ago by Federico Marini ▴ 180 • written 2.6 years ago by m610110001 • 0

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OutlierD pcaMethods MicroarrayData Microarray

3.8 years ago waiyin0923 • 0

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pcaMethods

3.8 years ago Gero • 0

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pcaMethods

4.0 years ago k.vitting.seerup ▴ 120

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pcamethods

updated 6.3 years ago by James W. MacDonald 67k • written 6.3 years ago by johnnytam100 • 0

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pcamethods missing data

7.8 years ago eli-sava • 0

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pcamethods

updated 7.9 years ago by James W. MacDonald 67k • written 7.9 years ago by allantanaka11 • 0

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metaboliteData pcaMethods pcamethods r package metabolite Data

updated 8.1 years ago by Valerie Obenchain ★ 6.8k • written 8.1 years ago by lukasz.galecki ▴ 10

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pcamethods r

8.8 years ago stolarek.ir • 0

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pcaMethods pcaMethods

10.9 years ago Julian Gehring ★ 1.3k

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pcaMethods pcaMethods

10.9 years ago Guest User ★ 13k

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pcaMethods pcaMethods

13.8 years ago Alfons Gonzalez ▴ 10

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pcaMethods pcaMethods

14.0 years ago Manca Marco PATH ▴ 340

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Clustering pcaMethods Clustering pcaMethods

14.7 years ago avinash gupta ▴ 130

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pcaMethods pcaMethods

updated 16.1 years ago by Wolfgang Huber ★ 13k • written 16.1 years ago by Yury Bukhman ▴ 20

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aroma.light pcaMethods aroma.light pcaMethods

updated 16.3 years ago by Sean Davis 21k • written 16.3 years ago by Tillinghast, Guy, M.D. ▴ 30

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impute pcaMethods impute pcaMethods

17.3 years ago De-Jian ZHAO ▴ 240

19 results • Page 1 of 1

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Answer: Selection of correct coefficients or contrasts in DESeq2 by swbarnes2 ★ 1.4k

I think you need to include the design you used, and the command you used to call it. The simplest answer is that your two ways of doing t…

Comment: Csaw normalization strategies - general inquiry by Luca • 0

Hello Aaron, About the IP efficiencies, yes definitely and for us, to complicate this experiment further, these batches were generated by …

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by Quang NN ▴ 10

Thank you ATpoint for your response. In bulkRNAseq, I did have two cell types to compare. But, I want to also see if bulkRNAseq might have …

Answer: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k

The choice of variable genes is typically part of a QC process. You select genes that in an unbiased fashion (unbiased because variance cal…

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by ATpoint ★ 4.6k

My take is that RNA-seq (be it bulk or single-cell) is inherently relative. I don't think you can really "compare" the absolute expression …

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Answer: Csaw normalization strategies - general inquiry

A: DESeq2 interaction term

Comment: Recount3 data correspond to TCGA data

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

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Scholar to Aaron Lun ★ 28k