Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
pwmenrich
•
reset
0
votes
0
replies
869
views
How to interpret difference statistic from the output of the motifDiffEnrichment() function in the PWMEnrich package?
PWMEnrich
6.7 years ago
intregen
• 0
0
votes
0
replies
1.0k
views
makeBackground error message "Sequence only contain N's"
pwmenrich
7.4 years ago
gdeniz
• 0
0
votes
1
reply
1.1k
views
subsetting PWMLognBackground object in the PWMEnrich package
PWMEnrich
7.6 years ago • updated 7.5 years ago
amanda.joy.price
▴ 10
0
votes
0
replies
947
views
PWMEnruch: Error in getPromoters(organism)
r
pwmenrich
7.7 years ago
prp291
• 0
0
votes
1
reply
2.4k
views
Convert HOMER motif matrix to pfm?
homer
pwmenrich
updated 9.1 years ago by
Ou, Jianhong
★ 1.3k • written 9.1 years ago by
sarah.blackstone7734
• 0
0
votes
0
replies
1.3k
views
question about motif enrichment analysis using PWMenrich
PWMenrich
9.1 years ago
sekawaiwai2006
▴ 20
2
votes
3
replies
2.3k
views
visualing pwm motif on a DNAstring
pwmenrich
dnastringset
updated 9.5 years ago by
Robert Stojnic
▴ 50 • written 9.5 years ago by
sekawaiwai2006
▴ 20
0
votes
0
replies
1.6k
views
Import motifs in .meme format in MotifDB
motfdb
pwmenrich
meme
9.5 years ago
enricoferrero
▴ 680
0
votes
3
replies
1.9k
views
motif scanning using position frequncy matrix of motif in a given set of DNAstringset sequnces?.
motifdb
matchpwm
motif
pwmenrich
pwm
9.9 years ago
vinod.acear
▴ 50
0
votes
1
reply
2.6k
views
non-numeric argument to binary operator error with makeBackground() in PWMEnrich
pwmenrich
MotifDB
updated 9.9 years ago by
Robert Stojnic
▴ 50 • written 9.9 years ago by
elliott77
• 0
2
votes
1
reply
1.4k
views
[PWMEnrich] Enrichment p-values on human sequences
pwmenrich
log
updated 10.1 years ago by
Robert Stojnic
▴ 50 • written 10.1 years ago by
enricoferrero
▴ 680
1
vote
3
replies
1.9k
views
getBackgroundFrequencies for Arabidopsis
pwmenrich
bsgenome
10.1 years ago
oliwindram
▴ 10
0
votes
5
replies
3.0k
views
Motif enrichment analysis: Error in transfac format and background frequencies from BSGenome
BSgenome
convert
BSgenome
PWMEnrich
MotifDb
updated 11.1 years ago by
Robert Stojnic
▴ 80 • written 11.1 years ago by
deepti anand
▴ 50
0
votes
0
replies
978
views
PWMEnrich::sequenceReport() and 'res' global variable
PWMEnrich
PWMEnrich
11.2 years ago
enricoferrero
▴ 680
0
votes
8
replies
2.1k
views
plotpfm has been removed in PWMEnrich?
PWMEnrich
PWMEnrich
updated 11.8 years ago by
Robert Stojnic
▴ 80 • written 11.8 years ago by
Fabrice Tourre
▴ 970
0
votes
1
reply
1.5k
views
PWMEnrich binding site position
PWMEnrich
PWMEnrich
updated 12.1 years ago by
Robert Stojnic
▴ 50 • written 12.1 years ago by
Guest User
★ 13k
16 results • Page
1 of 1
Recent ...
Replies
Comment: Sharing a collection of datasets in ExperimentHub
by
Peter Hickey
▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Answer: EuroBioC2023 abstract submission is open!
by
efuite222
• 0
Abstract submissions are now open for the #EuroBioC2023 conference in Ghent, Belgium, from September 20-22; submit by April 14 for opportu…
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
by
ReinholdGaylord99
• 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
abaed
• 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Awards
• All
Popular Question
to
Robert Baer
▴ 70
Popular Question
to
Stephen Piccolo
▴ 600
Popular Question
to
JKim
• 0
Popular Question
to
Gordon Smyth
53k
Popular Question
to
Guangchuang Yu
★ 1.2k
Locations
• All
WEHI, Melbourne, Australia,
37 minutes ago
The city by the bay,
1 hour ago
United States,
2 hours ago
United States,
5 hours ago
United States,
9 hours ago
Traffic: 971 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6