Showing : repostools • reset
0
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3
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5.1k
views
ellipse package
reposTools reposTools
updated 19.1 years ago by ★ 13k • written 19.1 years ago by ▴ 20
0
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2
replies
2.9k
views
Error in function (classes, fdef, mtable)
cdf genefilter reposTools gcrma matchprobes affyPLM simpleaffy affyio cdf genefilter
updated 17.5 years ago by ★ 7.4k • written 17.5 years ago by ▴ 360
0
votes
2
replies
1.7k
views
BioConductor Affy package
ROC reposTools affy ROC reposTools affy
21.4 years ago Susan J. Miller ▴ 20
0
votes
5
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1.6k
views
getBioC v1.2.22 & [R] v1.6.2
annotate edd genefilter geneplotter rhdf5 multtest ROC tkWidgets reposTools affy vsn
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 70
0
votes
4
replies
1.5k
views
Problems using text to subset array information from an expression set
cdf reposTools affy PROcess cdf reposTools affy PROcess
updated 18.1 years ago by ★ 4.3k • written 18.1 years ago by ▴ 110
0
votes
3
replies
1.4k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 18.1 years ago by ▴ 70 • written 18.1 years ago by ★ 2.2k
0
votes
7
replies
1.4k
views
getBioC and install.packages2 fail
Proteomics reposTools Proteomics reposTools
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ▴ 210
0
votes
0
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1.3k
views
Problems using text to subset array information from anexpression set
Cancer cdf reposTools affy PROcess Cancer cdf reposTools affy PROcess
18.1 years ago Alvord, Greg DMS [Contr] ▴ 160
0
votes
3
replies
1.3k
views
Recent changes to Bioconductor packages
reposTools graph Rgraphviz simpleaffy impute reposTools graph Rgraphviz simpleaffy impute
20.3 years ago • updated 20.2 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
3
replies
1.3k
views
widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 18.3 years ago by ★ 2.9k • written 18.3 years ago by ▴ 80
0
votes
5
replies
1.3k
views
R Hangs
reposTools PROcess reposTools PROcess
updated 20.8 years ago by ▴ 360 • written 20.8 years ago by ★ 3.4k
0
votes
1
reply
1.3k
views
zebrafish simpleaffy Error in FUN(X[[4]], ...) : subscript out of bounds
zebrafish cdf probe reposTools gcrma matchprobes simpleaffy zebrafish cdf probe gcrma
updated 18.8 years ago by ★ 1.4k • written 18.8 years ago by ★ 1.1k
0
votes
7
replies
1.2k
views
Installing bioconductor under MacOsx
reposTools reposTools
updated 21.1 years ago by ▴ 280 • written 21.1 years ago by ▴ 110
0
votes
4
replies
1.2k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 17.6 years ago by 25k • written 17.6 years ago by ★ 2.2k
0
votes
4
replies
1.2k
views
Problems installing v 1.2
Microarray GO rhdf5 reposTools Microarray GO rhdf5 reposTools
updated 21.0 years ago by ▴ 810 • written 21.0 years ago by ▴ 140
0
votes
3
replies
1.2k
views
Recent changes to Bioconductor packages
reposTools graph widgetTools limma reposTools graph widgetTools limma
20.6 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
2
replies
1.2k
views
getBioC(relLevel="devel") fails under r-devel
reposTools reposTools
updated 20.6 years ago by ★ 3.9k • written 20.6 years ago by ▴ 180
0
votes
0
replies
1.1k
views
Installing Rv2.0.0 on MacOS 10.3.x
moe430a cdf probe annotate genefilter reposTools affy annaffy moe430a cdf probe affy
19.6 years ago rkakkar@uchicago.edu ▴ 100
0
votes
1
reply
1.1k
views
help with getBioC
reposTools reposTools
updated 20.9 years ago by ▴ 810 • written 20.9 years ago by 50k
0
votes
2
replies
1.1k
views
problem with annaffy aafFunction function
GO hgu95av2 rat2302 Biobase annotate reposTools affy annaffy GO hgu95av2 rat2302 affy
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 890
0
votes
1
reply
1.1k
views
Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about chip type: moe430acdf
GO moe430a cdf reposTools limma gcrma matchprobes siggenes simpleaffy GO moe430a cdf
updated 18.9 years ago by ★ 1.4k • written 18.9 years ago by ★ 1.1k
0
votes
2
replies
1.1k
views
zebrafish simpleaffy Error in FUN(X[[4]], ...) : subscript out of bounds
zebrafish cdf probe reposTools gcrma matchprobes simpleaffy zebrafish cdf probe gcrma
updated 18.8 years ago by ▴ 780 • written 18.8 years ago by ★ 1.4k
0
votes
4
replies
1.1k
views
Recent changes to Bioconductor packages
Normalization hgu95a hgu95av2 annotate reposTools limma Normalization hgu95a hgu95av2
21.1 years ago • updated 21.0 years ago madman@jimmy.harvard.edu ▴ 850
0
votes
1
reply
1.1k
views
install package from local path with reposTools
reposTools reposTools
updated 18.2 years ago by ▴ 780 • written 18.2 years ago by ▴ 30
0
votes
1
reply
1.1k
views
File permission failures when building Bioconductor on AMD64/Opteron
reposTools affy reposTools affy
18.7 years ago Michael Redmond ▴ 20
0
votes
4
replies
1.0k
views
Which package "Multiget" belongs
Biobase reposTools affy Biobase reposTools affy
19.9 years ago nbing ▴ 30
0
votes
2
replies
1.0k
views
getBioC install problem in Fedora
reposTools reposTools
updated 19.3 years ago by ★ 5.5k • written 19.3 years ago by ▴ 320
0
votes
2
replies
1.0k
views
Need better quality control for reliable installation of bioconductor packages?
Cancer reposTools RdbiPgSQL PROcess twilight iSPlot Cancer reposTools RdbiPgSQL PROcess
updated 19.4 years ago by ★ 5.5k • written 19.4 years ago by 50k
0
votes
0
replies
1.0k
views
reposTool package: permission problems on liblisting.Rda file
reposTools reposTools
19.2 years ago Conrad Halling ▴ 10
0
votes
0
replies
1.0k
views
Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
17.0 years ago Seth Falcon ★ 7.4k
0
votes
3
replies
1.0k
views
Problem with BioC
reposTools reposTools
updated 19.7 years ago by ★ 3.9k • written 19.7 years ago by ▴ 100
0
votes
1
reply
1.0k
views
installatioin problem
rhdf5 reposTools graph Rgraphviz rhdf5 reposTools graph Rgraphviz
updated 20.8 years ago by ★ 3.9k • written 20.8 years ago by ▴ 20
0
votes
2
replies
998
views
Problems installing Bioconductor on linux(MEPIS)
reposTools reposTools
updated 19.5 years ago by ★ 5.5k • written 19.5 years ago by ▴ 420
0
votes
4
replies
975
views
(no subject)
annotate reposTools annotate reposTools
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 60
0
votes
3
replies
972
views
Problems by installing getBioC()
reposTools reposTools
updated 17.1 years ago by ★ 7.4k • written 17.1 years ago by ▴ 10
0
votes
1
reply
957
views
getBioC problem: reposTools
Genetics reposTools Genetics reposTools
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 1000
0
votes
2
replies
955
views
Error message when running install script.
Biobase reposTools Biobase reposTools
updated 21.4 years ago by ★ 2.9k • written 21.4 years ago by ▴ 40
0
votes
2
replies
955
views
Errors with latest version of R/Bioconductor
reposTools reposTools
updated 21.0 years ago by ▴ 20 • written 21.0 years ago by ▴ 280
0
votes
3
replies
947
views
problem with package version of rat2302 1.8.5
Annotation rat2302 Biobase reposTools affy Annotation rat2302 Biobase reposTools affy
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 890
0
votes
0
replies
928
views
Problems with getBioC (reposTools, really) and package Rgraphviz
reposTools graph Rgraphviz reposTools graph Rgraphviz
20.9 years ago Rafal Kustra ▴ 10
0
votes
2
replies
927
views
problem with CoCiteStats in bioC 1.8
cdf reposTools affy CoCiteStats affyio cdf reposTools affy CoCiteStats affyio
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 890
0
votes
0
replies
926
views
problem with get.genes.by.pathway
Biobase reposTools KEGGSOAP Biobase reposTools KEGGSOAP
18.6 years ago Kimpel, Mark W ▴ 890
0
votes
2
replies
918
views
bioconductor
reposTools reposTools
updated 21.3 years ago by ★ 3.9k • written 21.3 years ago by ▴ 10
0
votes
1
reply
917
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
0
votes
1
reply
909
views
Resourcerer warnings
GO Organism reposTools AnnBuilder Resourcerer GO Organism reposTools AnnBuilder
18.5 years ago Francois Pepin ★ 1.3k
0
votes
1
reply
906
views
GO problems with annaffy
GO hgu133a probe reposTools annaffy GO hgu133a probe reposTools annaffy
updated 20.1 years ago by ▴ 100 • written 20.1 years ago by ▴ 10
0
votes
2
replies
904
views
error in installing Bioconductor development packages
Biobase annotate genefilter reposTools affy Biobase annotate genefilter reposTools affy
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 10
0
votes
2
replies
890
views
cdfenv files ATTN: James McDonald
SNP cdf probe reposTools affy SNP cdf probe reposTools affy
updated 17.7 years ago by 65k • written 17.7 years ago by ▴ 20
0
votes
0
replies
890
views
Why mm's changing after bg.adjust.gcrma?
drosgenome1 cdf Biobase reposTools affy gcrma affyPLM simpleaffy affyQCReport affyio cdf
18.0 years ago Jenny Drnevich ★ 2.2k
0
votes
1
reply
890
views
BioC release 1.3
Biobase reposTools Biobase reposTools
20.6 years ago Josephine.Liang@uchsc.edu ▴ 60
50 results • Page 1 of 1
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Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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