Bioconductor Rmarkdown

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rmarkdown suppressWarning warning

updated 2.9 years ago by Mike Smith ★ 6.6k • written 4.1 years ago by Wolfgang Huber ★ 13k

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ReportingTools RNA-Seq RMarkdown

updated 5.3 years ago by James W. MacDonald 68k • written 5.3 years ago by anthony.nash ▴ 20

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BiocWorkflowTools rmarkdown

5.6 years ago helucro ▴ 70

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BrowseSeqs DECIPHER notebook rmarkdown

updated 6.3 years ago by Erik Wright ▴ 150 • written 6.3 years ago by lauren.fitch • 0

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rmarkdown knitr

updated 6.9 years ago by Aaron Lun ★ 29k • written 6.9 years ago by Keith Hughitt ▴ 180

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package development bioconductor rstudio rmarkdown vignettes

8.1 years ago clarisbaby • 0

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BiocStyle vignettes rmarkdown latex News

8.4 years ago Andrzej Oleś ▴ 750

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biocstyle Rmarkdown Tutorial

8.4 years ago Wolfgang Huber ★ 13k

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BiocWorkflowTools rmarkdown

updated 8.5 years ago by Andrzej Oleś ▴ 750 • written 8.5 years ago by Leonardo Collado Torres ★ 1.1k

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rmarkdown rstudio knitr

9.2 years ago Jon Bråte ▴ 270

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rmarkdown package updates

updated 9.3 years ago by James W. MacDonald 68k • written 9.3 years ago by tarek.mohamed ▴ 10

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Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0

The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

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Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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