Bioconductor Rna seq

Showing : rna seq • reset

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4.3k

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deseq2 mahattan plot RNA Seq

updated 5.3 years ago by bernatgel ▴ 150 • written 6.3 years ago by adeler001 • 0

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5.4k

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batch effect limma rna seq DE

updated 5.8 years ago by Steve Lianoglou ★ 13k • written 5.8 years ago by svlachavas ▴ 840

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1.6k

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RNA seq cpm

updated 5.8 years ago by Kevin Blighe ★ 4.0k • written 5.8 years ago by isabel.pieterse • 0

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1.6k

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sgseq alternative splicing rna seq

updated 18 months ago by Sara • 0 • written 6.2 years ago by 116100016 • 0

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1.4k

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edger RNA Seq

updated 6.2 years ago by James W. MacDonald 68k • written 6.2 years ago by abf ▴ 30

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853

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rna seq

6.2 years ago adeler001 • 0

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1.4k

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rna seq SGSeq Alternative splicing

updated 6.3 years ago by Leonard Goldstein ▴ 260 • written 6.3 years ago by 116100016 • 0

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874

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deseq2 likelihood ratio rna seq wald test

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by adeler001 • 0

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1.6k

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volcano plot rna seq

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by adeler001 • 0

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2.0k

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limma voom RNA Seq Time-course experiments

updated 6.6 years ago by Aaron Lun ★ 29k • written 6.6 years ago by mahes.muniandy • 0

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1.8k

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RNA seq wgcna

updated 6.6 years ago by Peter Langfelder ★ 3.0k • written 6.6 years ago by agustin.gonvi ▴ 20

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2.8k

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rna seq trimmomatic trimming adapter trimming paired analysis

6.7 years ago Mozart ▴ 30

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2.3k

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heatmap.2 hierarchical clustering microarray RNA seq DEG

7.9 years ago lawarde.ankita1 ▴ 30

13 results • Page 1 of 1

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Comment: Open Positions for Doctoral Researchers in Molecular Medicine by TikTs33ssalpc • 0

This rotation style program sounds like a great way to explore different fields before committing to one. Similarly, apkgamex lets users ex…

Comment: Bioconductor Maintainer Application by TikTs33ssalpc • 0

This compliance focused approach makes a lot of sense. Clear reminders and opt in policies help maintain trust, similar to how users look f…

Comment: Bile acid analysis with limpa by ATpoint ★ 5.0k

Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …

Comment: chemmineOB install help by Jeremy • 0

I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…

Votes

A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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