Bioconductor Rnaseqdtu

Showing : rnaseqdtu • reset

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876

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rnaseqDTU DRIMSeq

2.4 years ago wangziwei0010 ▴ 10

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1.5k

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rnaseqDTU

2.6 years ago • updated 2.5 years ago ksong ▴ 10

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1.6k

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DEXSeq rnaseqDTU

3.2 years ago rbenel ▴ 40

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1.5k

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RNA-seq DRIMSeq DEXSeq rnaseqDTU

3.3 years ago bioinformatic_trainee ▴ 10

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726

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rnaseqDTU

updated 4.0 years ago by Michael Love 42k • written 4.0 years ago by rohitsatyam102 ▴ 20

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831

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rnaseqdtu RNASeq DEXSeq DESeq2

updated 4.4 years ago by Michael Love 42k • written 4.4 years ago by debatosh das ▴ 10

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834

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rnaseqDTU

updated 4.5 years ago by Michael Love 42k • written 4.5 years ago by dixit.anirudha • 0

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978

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rnaseqDTU

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by nicog • 0

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1.6k

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rnaseqdtu

5.4 years ago rbenel ▴ 40

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1.6k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 5.6 years ago by Michael Love 42k • written 5.8 years ago by fiona.dick91 ▴ 60

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1.8k

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rnaseqDTU DRIMseq DEXseq rna-seq

5.6 years ago saddamhusain77 • 0

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3.7k

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tximport dtu salmon TPM rnaseqDTU

written 5.6 years ago by fiona.dick91 ▴ 60

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1.9k

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stageR rnaseqDTU DRIMSeq DEXSeq

5.8 years ago d-joester ▴ 20

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1.5k

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rnaseqdtu

5.8 years ago rbenel ▴ 40

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2.6k

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rnaseqDTU dtu

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by rbenel ▴ 40

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1.3k

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DTU DRIMSeq rnaseqDTU

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by fiona.dick91 ▴ 60

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1.2k

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drimseq rnaseqdtu stager

updated 6.0 years ago by Michael Love 42k • written 6.0 years ago by Jack.Hearn • 0

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1.8k

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DEXSeq StageR rnaseqDTU

updated 6.1 years ago by Michael Love 42k • written 6.1 years ago by rbenel ▴ 40

18 results • Page 1 of 1

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Comment: [How to construct a model.matrix ] by kyj2226 • 0

Thanks to you, I learn a lot. Many thanks, Yujin.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

thank you for your advice, I posted separate post.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k

Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…

Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k

DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…

Answer: [How to construct a model.matrix ] by Gordon Smyth 51k

> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…

Votes

Answer: [How to construct a model.matrix ]

C: DESeq2 baseMean values for each sample

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta

A: Some questions for remove batch effect by using mnnCorrect

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