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RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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12 months ago
Maria Doyle
▴ 70
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News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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12 months ago
Maria Doyle
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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12 months ago
Maria Doyle
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BioCAsia, 5-6th December 2019, Sydney, Australia
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4.9 years ago
Peter Hickey
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BioCAsia, 29-30th November 2018, Melbourne, Australia
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updated 5.4 years ago by
Gordon Smyth
50k • written 5.7 years ago by
Steve Pederson
▴ 170
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LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.3 years ago
mnchoi67
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May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.3 years ago
mnchoi67
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Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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8.2 years ago
Martin Morgan
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Help with neuroblastoma working group
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updated 8.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 8.7 years ago by
paul.mineau
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Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
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Wolfgang Huber
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9.3 years ago
gr231
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Beginner's guide to DESeq2 pdf link broken
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updated 9.5 years ago by
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41k • written 9.6 years ago by
sunshinne
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Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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9.6 years ago
Thomas Girke
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
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Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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