0
votes
0
replies
906
views
rGADEM crash
rGADEM rGADEM
12.3 years ago Arnaud Droit ▴ 20
0
votes
0
replies
780
views
duplicate correlation of 4 "within array replicates" limma gui
GUI limma microRNA GUI limma microRNA
15.6 years ago Christine Voellenkle ▴ 90
0
votes
0
replies
794
views
Harshlight (or similar) for Agilent arrays
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14.6 years ago David Garfield ▴ 30
0
votes
0
replies
1.2k
views
Error: cannot allocate vector of size 618.0 Mb
Annotation Cancer cdf Annotation Cancer cdf
11.5 years ago Henrik Bengtsson ★ 2.4k
2
votes
3
replies
4.7k
views
WGCNA "bicor" correlation
wgcna bicor WGCNA
8.6 years ago bcbio_uk ▴ 10
0
votes
0
replies
319
views
[Flickr] MYSTERY SHOPPER !!! wants you to see a photo
15.8 years ago MYSTERY SHOPPER !!! (via Flickr) ▴ 10
2
votes
3
replies
1.4k
views
An error using Diffbind plotprofile
ChIPSeq profileplyr DiffBind
updated 2.7 years ago by ▴ 20 • written 2.8 years ago by • 0
0
votes
1
reply
1.3k
views
DSS CpG coverage threshold
DSS WGBS coverage
updated 7 days ago by • 0 • written 6.6 years ago by ▴ 30
0
votes
0
replies
1.5k
views
ConsensusClusterPlus updated
Clustering ConsensusClusterPlus Clustering ConsensusClusterPlus
11.1 years ago Matthew D. Wilkerson ▴ 20
0
votes
0
replies
671
views
rpubchem is not working , or is it ?
rpubchem
7.0 years ago bioinformatics ▴ 10
0
votes
0
replies
618
views
Gating template for monocytes?
opencyto gating
6.9 years ago justinyi10 ▴ 10
0
votes
0
replies
581
views
R packages
Microarray Microarray
21.5 years ago Janice Cooke ▴ 10
0
votes
1
reply
1.4k
views
InSilicoMerging error when using merge
insilicomerging error insilicodb expressionset
7.3 years ago andreas.pittroff • 0
0
votes
0
replies
411
views
Den Tists Directory in the United States
14.9 years ago Mauricio S Estrada ▴ 10
0
votes
0
replies
830
views
(no subject)
Clustering probe limma GLAD Clustering probe limma GLAD
11.8 years ago Gordon Smyth 50k
0
votes
0
replies
704
views
MvA plotting error
19.2 years ago Puhong Gao ▴ 140
0
votes
0
replies
692
views
PI/senior computational biologist in Ireland
15.9 years ago Aedin Culhane ▴ 510
0
votes
0
replies
861
views
Coefmap plot without the sorting
coefmap cellmix
8.4 years ago thrabe • 0
0
votes
0
replies
800
views
Fwd: Limma - replicate Fold change values - rank product analysis
GO limma GO limma
14.4 years ago Neel Aluru ▴ 460
0
votes
0
replies
559
views
Basic questons about two-color array
Normalization Normalization
11.5 years ago Feng Tian ▴ 110
0
votes
0
replies
973
views
Differentially Expressed Genes in Time Series with Replications
Yeast cycle Yeast cycle
17.3 years ago peter robinson ▴ 300
0
votes
0
replies
782
views
:Export 1 way cluster to treeview
Clustering ctc Clustering ctc
19.4 years ago Anthony Bosco ▴ 500
0
votes
0
replies
584
views
Option request for featureCounts: Add an order of read manipulation to 'shift > reduction > extension'
SubRead featureCounts
updated 18 months ago by ★ 4.1k • written 18 months ago by • 0
0
votes
2
replies
1.4k
views
S4Vectors (and others) install error
s4vectors
updated 5.0 years ago by 42k • written 5.0 years ago by • 0
0
votes
0
replies
678
views
Illumina Chip-Seq software
15.3 years ago Lana Schaffer ★ 1.3k
0
votes
0
replies
642
views
Keep getting warning messages of package 'XYZ' was built under R version 2.8.1
15.2 years ago Patrick Aboyoun ★ 1.6k
1
vote
1
reply
1.1k
views
DTU using DEXSeq (time series data with condition factor)
DTU DEXSeq RNADTU
updated 2.3 years ago by ★ 1.9k • written 2.7 years ago by ▴ 10
0
votes
0
replies
427
views
Limma with Imagene - reading control status
20.5 years ago Edo Plantinga ▴ 10
0
votes
0
replies
595
views
marray intensity normalization? dangerous waters
marray marray
18.9 years ago Simon Lin ▴ 210
0
votes
0
replies
384
views
need help with methylation locus identification and YAMA
segmentSeq
15 months ago Poonam • 0
0
votes
0
replies
1.3k
views
How to format SWAN minfi data for bumphunter?
minfi bumphunter minfi bumphunter
10.9 years ago Guest User ★ 13k
0
votes
0
replies
820
views
Exceptionnel, l'ensemble Melinda aux prix de 7.90€ (au lieu de 30.80€) + de nombreuses offres. Profitez en.
15.6 years ago Clara de Dessous Chéri ▴ 130
0
votes
1
reply
374
views
To check samples in manifest that do not have IDAT files
software error
4.9 years ago pspooja111 • 0
1
vote
1
reply
648
views
export the significant results from EDGE
microarray edge
5.0 years ago xgt1986627 ▴ 10
0
votes
0
replies
846
views
10 cadeaux au choix chez Dessous Cheri
15.5 years ago Clara de Dessous Chéri ▴ 130
0
votes
0
replies
425
views
Using BioC or R functions in C-programs
16.2 years ago Martin Morgan 25k
0
votes
0
replies
330
views
limma: semi-bug (?) report for toptable
18.5 years ago Dr. D. P. Kreil ▴ 30
0
votes
0
replies
608
views
Eleonore Gravier/CURIE est absent(e).
14.1 years ago Eleonore Gravier/CURIE ▴ 50
1
vote
3
replies
1.2k
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
4.7 years ago cahyasu88 • 0
0
votes
0
replies
848
views
R: STRINGdb, from get_enrichment() function how to get background gene list that are related to pathways?
R STRINGdb
2.9 years ago choijamts • 0
0
votes
0
replies
893
views
handling scanalyze output format
Preprocessing convert Preprocessing convert
20.5 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
869
views
P-values returned from siggenes's sam() function
multtest multtest
15.1 years ago Michal Blazejczyk ▴ 320
0
votes
0
replies
489
views
[maSigPro] Splitting data - how?
13.1 years ago boczniak767 ▴ 720
0
votes
0
replies
875
views
test data doesn't work and makeRBD function doesn't work either at BubbleTree
software error
8.4 years ago jial2 • 0
0
votes
0
replies
1.8k
views
Percentage of Variance to be included at 3D graph, of Principal Component Analysis (PCA)- made4 package
Cancer graph made4 Cancer graph made4
13.6 years ago Aedin Culhane ▴ 510
1
vote
1
reply
926
views
Recommendations for Protein Network Data Structure
AnnotationDbi Bimap Interactome
6.0 years ago Dario Strbenac ★ 1.5k
0
votes
0
replies
1.1k
views
1st Call for Papers - 2nd International Symposium on Distributed Computing and Artificial Intelligence (DCAI'09)
15.4 years ago Nora Muda ▴ 70
0
votes
0
replies
510
views
Inter-lab variability in Expression
17.1 years ago Tarun Nayar ▴ 190
0
votes
0
replies
735
views
Off topic: predoctoral grant
Regression Survival Cancer Regression Survival Cancer
20.6 years ago Ramon Diaz ★ 1.1k
0
votes
0
replies
1.2k
views
a possible bug in spia function
SPIA
6.8 years ago slava.ilyntskyy • 0
1,000 results • Page 2 of 20
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Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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