Showing : AffymetrixChip • reset
2
votes
1
reply
514
views
Using Affymetrix Custom Array
ArrayExpress makecdfenv AffymetrixChip gcrma GeneExpression
updated 11 months ago by 68k • written 11 months ago by • 0
0
votes
0
replies
370
views
Remove Control Probes from Affymetrix Human Gene 1.0 ST Array probeset version
AffymetrixDataTestFiles AffymetrixChip
16 months ago drexjaramel • 0
0
votes
4
replies
1.1k
views
Unable to annotate ExpressionSet object from hugene11st chip
oligo limma hugene11stprobeset.db AffymetrixChip
19 months ago Efra • 0
0
votes
1
reply
1.2k
views
Affymetrix hgu133plus2.db: How to best derive an expression value for genes that map to multiple probe ids
affydata hgu133plus2.db AffymetrixChip
updated 2.3 years ago by ★ 5.0k • written 2.3 years ago by ▴ 20
1
vote
2
replies
1.0k
views
Affymetrix analysis Chiptype hgu133plus2hsentrezg.db vs hgu133plus2.db
hgu133plus2hsentrezg.db chiptype chipster hgu133plus2.db AffymetrixChip
2.4 years ago alexia.brunel • 0
1
vote
4
replies
1.4k
views
How to annotate mir4.1 arrays?
AffymetrixChip miRNA oligo
2.5 years ago • updated 2.3 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
964
views
Volcano plot
limma AffymetrixChip
2.5 years ago e.gunaut • 0
2
votes
2
replies
1.2k
views
Question about transforming log expression values to antilog values in limma
IlluminaChip limma AffymetrixChip Normalization Microarray
2.6 years ago Abdul ▴ 20
1
vote
1
reply
1.4k
views
Strange error with RMA during Affymetrix data analysis
AffymetrixChip RMA
updated 3.0 years ago by ★ 6.6k • written 3.0 years ago by ▴ 20
2
votes
2
replies
1.0k
views
2-Way Repeated Measures ANOVA - Affymetrix
AffymetrixChip MicroarrayData Anova
3.0 years ago evan.j.williams ▴ 10
2
votes
2
replies
1.4k
views
How to compute P/A calls at gene-level probeset of Human Gene 1.0 ST Array
pd.hugene.1.0.st.v1 oligo AffymetrixChip
3.4 years ago Yang Shi ▴ 10
2
votes
5
replies
1.7k
views
Equivalence between PSDABG and Logarithmic Intensity Error (PLIER) Estimation
pd.hugene.1.0.st.v1 oligo AffymetrixChip
3.4 years ago Yang Shi ▴ 10
2
votes
4
replies
1.8k
views
Robust Multi-array Average could get negative value or not?
pd.hg.u219 oligo AffymetrixChip
3.5 years ago Yang Shi ▴ 10
4
votes
10
replies
2.9k
views
Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
pd.hg.u219 Microarray oligo AffymetrixChip
3.5 years ago Yang Shi ▴ 10
0
votes
2
replies
1.2k
views
How to extract probe level intensity after rma() normalization
MicroarrayData AffymetrixChip
updated 3.5 years ago by 68k • written 3.5 years ago by • 0
0
votes
4
replies
1.4k
views
getProbeInfo and exprs return two different dimensions
CELfile MicroarrayData AffymetrixChip
3.6 years ago Haoran • 0
2
votes
2
replies
1.4k
views
Subscript out of bounds while normalising using affy::rma()
Normalization affy AffymetrixChip
4.5 years ago geoffrey ▴ 10
0
votes
1
reply
1.3k
views
Microarray: Build annotation for HT MG430PM affymetrix
AffymetrixChip Microarray affymetrix
updated 4.6 years ago by ★ 4.1k • written 4.6 years ago by • 0
3
votes
2
replies
1.9k
views
Trouble getting probe ID info from mouse4302.db annotation package with a specific RefSeq ID.
annotationdbi mouse4302 affymetrixchip annotationdata R
updated 10.0 years ago by 68k • written 10.0 years ago by • 0
0
votes
4
replies
2.8k
views
HUgene 2.0 analyses heatmap
hugene20 heatmap affymetrixchip
updated 10.5 years ago by ▴ 130 • written 10.5 years ago by ▴ 10
2
votes
5
replies
3.6k
views
miRNA expression analysis : annotation
miRNA annotation affymetrixchip
10.6 years ago aswathym ▴ 10
0
votes
0
replies
1.5k
views
Correst use of GeneOverlap R Package
GeneOverlap DEGgenes affymetrixchip bioconductor
10.6 years ago svlachavas ▴ 840
1
vote
3
replies
2.0k
views
BioNet package network analysis important questions for tutorial
BioNet bioconductor affymetrixchip network analysis
10.7 years ago svlachavas ▴ 840
5
votes
9
replies
4.2k
views
Merge different datasets regarding a common number of DE genes in R
bioconductor expresiondataset affymetrixchip differential gene expression
10.7 years ago svlachavas ▴ 840
1
vote
4
replies
4.0k
views
GeneChip Human Transcriptome Array 2.0 analysis in R for identifying possible differential exon splicing events
affymetrixchip GenechipHumanTranscriptomeArray2.0 exon array analysis
10.7 years ago svlachavas ▴ 840
3
votes
11
replies
4.2k
views
Filtering on present/absent calls methodology and perfect match only arrays
bioconductor mas5 perfectmatch affymetrixchip filter
updated 10.7 years ago by 68k • written 10.7 years ago by ▴ 840
0
votes
0
replies
2.6k
views
MAplot: Binning grid too coarse for current (small) bandwidth
affy affymetrix affymetrics affymetrixchip
10.8 years ago neverstop • 0
0
votes
1
reply
2.2k
views
Having trouble with new brainarray CDF
Microarray Annotation AnnotationData AffymetrixChip hgu133a2 cdf probe graph AnnotationDbi
updated 14.5 years ago by ★ 7.2k • written 14.5 years ago by ▴ 100
28 results • Page 1 of 1
Recent ...
Replies
Answer: Important: Bioconductor Release 3.22 Delayed by oliviamillerama • 0
I completely understand delays like this because technical issues can happen anytime. It feels a bit like [Draw Climber][1] when one small …
Comment: VariantAnnotation does escape = within header string quotes by Daniel Cameron ▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data by Alexander • 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Comment: featureCounts -L: high unassigned:mapq fraction by eja.gssssssse.r.m • 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Kevin Blighe ★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
Awards • All
Scholar to shepherl 4.2k
Scholar to James W. MacDonald 68k
Popular Question to Daniel Cameron ▴ 40
Popular Question to Peter Hickey ▴ 760
Popular Question to edward.esiribloom • 0
Locations • All
United States, 1 hour ago
United States, 2 hours ago
WEHI, Melbourne, Australia, 3 hours ago
Finland, 3 hours ago
United States, 4 hours ago
Traffic: 780 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6