Biostar Annotationhub

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2.1k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 12 months ago by Hervé Pagès 16k • written 12 months ago by jon.klonowski ▴ 40

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964

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AnnotationHub OrgDb snapshotDate

updated 6 months ago by shepherl 3.4k • written 2.7 years ago by Jenny Drnevich ★ 2.0k

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12k

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AnnotationHub dplyr

updated 6 months ago by SmallChess ▴ 10 • written 2.2 years ago by georgia.katsoula ▴ 40

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3.4k

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AnnotationHub AnnotationDbi AnnotationForge pathview

6.0 years ago • updated 5 months ago Jenny Drnevich ★ 2.0k

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772

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AnnotationHub OrganismDbi org.Hs.eg.db

updated 10 months ago by Gordon Smyth 47k • written 10 months ago by Nathan • 0

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235

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BSgenome.Hsapiens.UCSC.hg19 rtracklayer AnnotationHub

5 months ago • updated 4 months ago Lenny186 • 0

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2.2k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 3 months ago by Johannes Rainer ★ 2.0k • written 4.2 years ago by Guido Hooiveld ★ 3.5k

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2.5k

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clusterProfiler AnnotationHub GO uniprot

updated 10 months ago by Guido Hooiveld ★ 3.5k • written 24 months ago by Alberto • 0

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2.2k

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AnnotationHub biomaRt

updated 5 months ago by alvea2008667 • 0 • written 22 months ago by rohitsatyam102 ▴ 20

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357

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AnnotationHub AnnotationForge Pseudomonas_aeruginosa

updated 6 weeks ago by James W. MacDonald 62k • written 7 weeks ago by Manmohit • 0

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913

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AnnotationHub

13 months ago • updated 8 months ago nattzy94 ▴ 20

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297

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AnnotationHub org.Hs.eg.db ensembldb

6 months ago • updated 5 months ago sandmann.t ▴ 70

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metaboliteIDmapping AnnotationHub multiGSEA

8 days ago Thomas • 0

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413

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AnnotationHub

10 months ago junliqilinpan • 0

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789

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AnnotationHub Install

updated 10 months ago by shepherl 3.4k • written 10 months ago by nhaus • 0

15 results • Page 1 of 1

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Comment: Empty ChipQC Report by Okan • 0

Hi, I have the same issue. Have you found any solution or any reason why this is happening?

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

Am I understanding correctly that you have 24 RNA-seq libraries in total, 6 from the pooled samples and 18 from regular samples with biolog…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by k.roelfs • 0

I'm sorry, I know it is kinda confusing... We have 6 pools in total: Phenotype A: T1a, T2, T1b, T1c Phenotype B: T1, T2 Each pool consist…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

Sorry, I don't understand your experiment. You are reading the edgeR Section on on what to do without replicates, but your experiment appe…

Answer: MA plot by Nathalie • 0

Thank you very much for your help and comments. There is errors in my file. BaseMean is BaseMeanLog2. I don't know how insert a file.

Votes

Volcano Plot in R

Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.

Answer: MA plot

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Teacher to Michael Love 39k

Teacher to James W. MacDonald 62k

Popular Question to Assa Yeroslaviz ★ 1.5k

Scholar to ATpoint ★ 2.0k