Showing : Deconvolution • reset
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Cell type deconvolution of RNAseq data- Create signature matrix of cells
deconvolution rnaseqGene RNAseq
6 months ago JG13 • 0
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How to deal with Expression set assembly problem?
deconvolution r scRNAseq bioinformatics
2.9 years ago Hasan Alanya • 0
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1.1k
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Best deconvolution method
Deconvolution
3.1 years ago Barista • 0
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1
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808
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PSEA deconvolution; some of the coefficient is NA?
PSEA Deconvolution
4.5 years ago kavator ▴ 30
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Deconvolution methods from WGBS data (methylation)
methylCC deconvolution methylation dmrseq serum
4.7 years ago marcin.bazyliszek • 0
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2
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910
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csSAMfit with covariates
limma microarray deconvolution cell type
updated 4.8 years ago by 52k • written 4.9 years ago by • 0
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4
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1.5k
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varianceStabilizingTransformation for clustering, deconvolution
deseq2 deconvolution normalization limma
updated 5.9 years ago by 43k • written 5.9 years ago by ▴ 30
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Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution methods
6.9 years ago casey.rimland ▴ 170
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1.2k
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Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution rnaseq psea
6.9 years ago WouterDeCoster ▴ 130
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2.9k
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Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution rna-seq
updated 9.2 years ago by ★ 13k • written 9.2 years ago by ▴ 160
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CellMix - Custom matrix with Abbas signature
deconvolution cellmix
9.5 years ago carleshf ▴ 10
11 results • Page 1 of 1
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Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts by O'Brien • 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0
This is useful information.
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0
Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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