Showing : Deconvolution • reset
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Cell type deconvolution of RNAseq data- Create signature matrix of cells
deconvolution rnaseqGene RNAseq
5 months ago JG13 • 0
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2
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1.5k
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How to deal with Expression set assembly problem?
deconvolution r scRNAseq bioinformatics
2.8 years ago Hasan Alanya • 0
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1.1k
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Best deconvolution method
Deconvolution
3.0 years ago Barista • 0
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1
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798
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PSEA deconvolution; some of the coefficient is NA?
PSEA Deconvolution
4.4 years ago kavator ▴ 30
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Deconvolution methods from WGBS data (methylation)
methylCC deconvolution methylation dmrseq serum
4.6 years ago marcin.bazyliszek • 0
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2
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896
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csSAMfit with covariates
limma microarray deconvolution cell type
updated 4.8 years ago by 51k • written 4.8 years ago by • 0
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4
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1.5k
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varianceStabilizingTransformation for clustering, deconvolution
deseq2 deconvolution normalization limma
updated 5.8 years ago by 43k • written 5.8 years ago by ▴ 30
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1.1k
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Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution methods
6.8 years ago casey.rimland ▴ 170
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1.2k
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Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution rnaseq psea
6.8 years ago WouterDeCoster ▴ 130
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2.8k
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Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution rna-seq
updated 9.1 years ago by ★ 13k • written 9.1 years ago by ▴ 160
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CellMix - Custom matrix with Abbas signature
deconvolution cellmix
9.5 years ago carleshf ▴ 10
11 results • Page 1 of 1
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Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
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Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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