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Devel
•
reset
3
votes
18
replies
2.9k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 17 days ago
shepherl
3.9k
0
votes
1
reply
2.1k
views
Is there a way to change the name of R package that is already published on bioconductor?
r
developers
devel
updated 8.5 years ago by
Martin Morgan
25k • written 8.5 years ago by
MarcinKosiński
• 0
2
votes
9
replies
1.6k
views
New annotation package - no response from packages@bioconductor.org
Devel
devel
updated 2.9 years ago by
kayla.interdonato
▴ 160 • written 2.9 years ago by
athief
▴ 20
0
votes
2
replies
1.5k
views
unable to load shared object Rsamtools.dll':
Devel
updated 2.6 years ago by
Mike Smith
★ 6.5k • written 2.6 years ago by
Franck
• 0
0
votes
0
replies
1.3k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
6.5 years ago
shepherl
3.9k
3
votes
1
reply
1.2k
views
Reverse the effect of useDevel()
bioconductor
devel
developers
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
andrew.j.skelton73
▴ 370
0
votes
1
reply
1.2k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
5.2 years ago
shepherl
3.9k
4
votes
2
replies
1.2k
views
GenomicRanges::union fails on R devel
devel
GenomicRanges
2.6 years ago
Guillaume Devailly
▴ 60
0
votes
4
replies
1.2k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
2.1 years ago • updated 18 months ago
shepherl
3.9k
3
votes
6
replies
1.1k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 13 months ago by
darrelvanhoy
• 0 • written 14 months ago by
shepherl
3.9k
0
votes
1
reply
1.1k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
5.3 years ago
shepherl
3.9k
1
vote
0
replies
1.0k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
5.6 years ago
shepherl
3.9k
0
votes
1
reply
966
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
5.1 years ago
shepherl
3.9k
1
vote
2
replies
900
views
GO.db for Bioconductor 3.17
GO.db
devel
14 months ago
Amanda D. Clark
• 0
0
votes
0
replies
884
views
News:
Important Deadlines for RELEASE
release
devel
deadline
News
updated 4.5 years ago by
Martin Morgan
25k • written 4.5 years ago by
shepherl
3.9k
0
votes
0
replies
878
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
4.0 years ago
shepherl
3.9k
0
votes
2
replies
877
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
13 months ago • updated 11 months ago
shepherl
3.9k
1
vote
0
replies
851
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
2.6 years ago
shepherl
3.9k
1
vote
0
replies
829
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
2.2 years ago
shepherl
3.9k
0
votes
3
replies
819
views
Package Review/Release Timeline
Devel
updated 23 months ago by
Gordon Smyth
50k • written 23 months ago by
Jonathan
• 0
0
votes
0
replies
814
views
News:
Deadline for commits to current Release 3.9 Branch and Devel 3.10
release
freeze
deadline
devel
News
4.6 years ago
shepherl
3.9k
0
votes
0
replies
806
views
News:
knitr ERROR on Biocondcutor builders
Devel
Bioconductor
Packages
BuildReport
devel
2.8 years ago
shepherl
3.9k
0
votes
0
replies
804
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
3.1 years ago • updated 3.0 years ago
shepherl
3.9k
0
votes
0
replies
776
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
17 months ago
Robert Castelo
★ 3.3k
0
votes
2
replies
756
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
18 months ago
shepherl
3.9k
0
votes
0
replies
739
views
News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
News
4.1 years ago
shepherl
3.9k
0
votes
4
replies
727
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 6 months ago by
Guido Hooiveld
★ 3.9k • written 6 months ago by
shepherl
3.9k
0
votes
0
replies
724
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
19 months ago
shepherl
3.9k
0
votes
0
replies
724
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
3.0 years ago
shepherl
3.9k
0
votes
7
replies
692
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
9 weeks ago • updated 11 days ago
shepherl
3.9k
4
votes
0
replies
657
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
20 months ago • updated 19 months ago
shepherl
3.9k
0
votes
0
replies
619
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
2.1 years ago
shepherl
3.9k
0
votes
0
replies
566
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
18 months ago
shepherl
3.9k
0
votes
2
replies
531
views
No compilation on Windows y compilation on linux
Devel
PackageType
deve
11 months ago
Franck RICHARD
• 0
0
votes
3
replies
530
views
Suggested package missing from Development version of Bioconductor
Devel
updated 7 months ago by
shepherl
3.9k • written 7 months ago by
Richard
• 0
35 results • Page
1 of 1
Recent ...
Replies
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
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