Bioconductor Ensembldb

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5.7k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 5 weeks ago by Shiva • 0 • written 5.5 years ago by Guido Hooiveld ★ 4.0k

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5.9k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 9 weeks ago by shepherl 3.9k • written 2.3 years ago by jon.klonowski ▴ 40

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353

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ensembldb genomei GenomeInfoDb

3 months ago Kai Hu ▴ 70

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4.2k

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biomaRt ensembldb UniProt.ws

updated 7 months ago by Marcel Ramos 690 • written 21 months ago by Recep ▴ 20

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240

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TxDb.Mmusculus.UCSC.mm9.knownGene ensembldb GenomicFeatures Mus_musculus

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by ramonmassoni ▴ 10

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1.4k

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ensembldb

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by Max ▴ 10

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518

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Rstudio cDNA ensembldb NCBI

5 months ago R_Page • 0

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298

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ensembldb

updated 21 days ago by James W. MacDonald 65k • written 21 days ago by Fara • 0

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187

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ensembldb transcriptome genome coordinateconversion

updated 6 weeks ago by Michael Love 42k • written 6 weeks ago by saadmurtazakhan ▴ 10

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501

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Rsubread ensembldb

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by Ya • 0

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854

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AnnotationHubSoftware ensembldb

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by cjag • 0

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833

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RStudio convert ensembldb NCBI

6 months ago j_denton • 0

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239

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ensembldb biomaRt

updated 3 months ago by Robin • 0 • written 3 months ago by Pez ▴ 10

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585

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GO ensembldb

6 months ago Rockbar • 0

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981

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Annotation biomaRt ensembldb

written 2.5 years ago by Lillian • 0

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2.6k

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ensembldb SNP SNPData genomes

written 2.2 years ago by Weiqiong • 0

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ensembldb biomaRt ensemblrelease

1 day ago Aleena ▴ 30

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1.5k

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ensembldb biomaRt

updated 9 months ago by Michael Love 42k • written 10 months ago by Benjamin ▴ 30

18 results • Page 1 of 1

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Marcel Ramos 690

`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…

Comment: error running enricher from clusterprofiler by Yael • 0

It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian

Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Votes

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Answer: Trim/Filter out-of-bounds GRanges

Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

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Scholar to Michael Love 42k

Popular Question to Vincent J. Carey, Jr. 6.7k