Showing : Gviz • reset
4
votes
5
replies
3.1k
views
Gviz: Plot only exons?
gviz
9.8 years ago stianlagstad ▴ 90
0
votes
1
reply
1.8k
views
Gviz: Placement of chromosome name in IdeogramTrack?
gviz
updated 9.8 years ago by ★ 1.6k • written 9.9 years ago by ▴ 90
1
vote
1
reply
1.2k
views
Gviz: Using a grid to plot AlignmentsTracks from different regions. How to use the same y-axis?
gviz
updated 9.8 years ago by ★ 1.6k • written 9.9 years ago by ▴ 90
2
votes
1
reply
3.2k
views
Gviz: Given transcript names and TxDb, how do you plot grouped transcripts?
gviz
9.8 years ago stianlagstad ▴ 90
1
vote
3
replies
2.1k
views
Givz sashimi plot controlling the height of plots.
gviz sashimi plots
updated 9.8 years ago by ▴ 750 • written 9.8 years ago by • 0
2
votes
3
replies
3.2k
views
Gviz Sashimi Plots
Gviz Sashimi Plots
updated 9.8 years ago by ▴ 750 • written 9.8 years ago by • 0
3
votes
2
replies
3.5k
views
about UCSCtrack in Gviz
Gviz
updated 9.8 years ago by ▴ 750 • written 9.9 years ago by ▴ 670
0
votes
1
reply
1.7k
views
Gviz ploting of annotation for H3K4me3 and H3Kme1 from UCSC
gviz ucsc
updated 9.9 years ago by ▴ 750 • written 9.9 years ago by • 0
0
votes
1
reply
1.6k
views
Gviz Group of different sizes
gviz R granges
updated 9.9 years ago by ★ 1.6k • written 9.9 years ago by • 0
4
votes
2
replies
2.9k
views
Create custom IdeogramTrack (Gviz)
gviz ideogram
updated 9.9 years ago by ★ 1.6k • written 9.9 years ago by ▴ 10
2
votes
3
replies
1.6k
views
Gviz: Keep transcripts on same line even when using reverseStrand+showId?
gviz
updated 9.9 years ago by ★ 1.6k • written 9.9 years ago by ▴ 90
2
votes
4
replies
1.7k
views
Gviz: HighlightTrack doesn't react to reverseStrand = TRUE ?
gviz
updated 9.9 years ago by ★ 1.6k • written 9.9 years ago by ▴ 90
0
votes
2
replies
1.4k
views
Gviz - ReverseStrand incompatible with just.group="above"
gviz
updated 9.9 years ago by ▴ 750 • written 9.9 years ago by ▴ 10
3
votes
3
replies
6.0k
views
Gviz - Cannot plot exons from gencode GTF files
gviz
10.0 years ago • updated 9.9 years ago romain.fenouil ▴ 10
0
votes
5
replies
2.9k
views
Gviz - BiomartGeneRegionTrack and gene symbol
gviz
10.0 years ago romain.fenouil ▴ 10
0
votes
0
replies
1.4k
views
Gviz - Split a GeneRegionTrack by strand
gviz
10.0 years ago romain.fenouil ▴ 10
3
votes
5
replies
2.3k
views
UcscTrack and BED without headers
gviz BED Ucsc UcscTrack
10.0 years ago Andy91 ▴ 60
1
vote
1
reply
2.0k
views
Different junction numbers from sashimi plot of Gviz package and summarizeJunctions() of GenomicAlignments package
gviz genomicalignments
updated 10.0 years ago by ▴ 750 • written 10.0 years ago by • 0
1
vote
4
replies
3.2k
views
It is possible to use Gviz without a valid UCSC genome?
gviz UCSC
updated 10.1 years ago by ★ 1.6k • written 10.2 years ago by ▴ 40
5
votes
3
replies
1.5k
views
sequenceLayer memory/C code problem?
genomicalignments c gviz
updated 10.2 years ago by 16k • written 10.2 years ago by ★ 2.1k
2
votes
5
replies
3.2k
views
Plot data from VCF using Gviz?
gviz variantannotation vcf
updated 10.2 years ago by ★ 6.8k • written 10.2 years ago by ★ 2.1k
0
votes
0
replies
1.2k
views
Gviz: BiomartGeneRegionTrack filters for canonical transcripts
gviz
10.3 years ago roll • 0
1
vote
4
replies
3.1k
views
Gviz: BiomartGeneRegionTrack filters=??
gviz
updated 10.3 years ago by ★ 1.6k • written 10.3 years ago by • 0
0
votes
1
reply
2.1k
views
Error in CummeRbund installation
gviz hmisc
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by • 0
0
votes
0
replies
1.6k
views
Shape of Gviz DataTrack marker
R Gviz DataTrack Shape Marker
10.3 years ago M. Mueller • 0
1
vote
1
reply
1.4k
views
Forge a BSgenome data package
bsgenome biostrings Gviz
updated 10.3 years ago by 16k • written 10.3 years ago by ▴ 40
0
votes
1
reply
1.8k
views
Gviz plot blank IdeogramTrack
gviz ideogram
updated 10.3 years ago by ▴ 750 • written 10.4 years ago by • 0
6
votes
7
replies
3.7k
views
Error: Failed to set session genome to...
gviz rtracklayer
updated 10.4 years ago by ★ 1.6k • written 10.7 years ago by ▴ 140
1
vote
1
reply
1.7k
views
How can I pass additional arguments to a custom Gviz importFunction in DataTrack?
gviz
updated 10.4 years ago by 68k • written 10.4 years ago by ▴ 40
0
votes
3
replies
1.7k
views
Question: Change the color of the link between 2 features belonging to the same group depending on the type of the link
annotationTrack Gviz
updated 10.4 years ago by ★ 1.6k • written 10.5 years ago by ▴ 40
0
votes
1
reply
2.1k
views
Problem with visualising empty tracks from ensembl
gviz ensembl
updated 10.4 years ago by ★ 1.6k • written 10.4 years ago by • 0
0
votes
3
replies
2.0k
views
gviz library plot 2 gene loci in the same figure
gviz
updated 10.4 years ago by ★ 1.6k • written 10.4 years ago by ▴ 200
3
votes
4
replies
3.9k
views
Gviz GeneRegionTrack draw only one gene in the range
Gviz
updated 10.4 years ago by ▴ 750 • written 10.4 years ago by ▴ 200
2
votes
6
replies
3.6k
views
IdeogramTrack from Gviz with chromosome name "4" rather "chr4"
Gviz
updated 10.4 years ago by ▴ 750 • written 10.4 years ago by ▴ 200
0
votes
4
replies
2.0k
views
Change the features and colors in BiomartGeneRegionTrack
gviz
10.5 years ago Tiphaine Martin ▴ 40
1
vote
2
replies
2.1k
views
"confint" type in DataTrack function (Gviz)
Gviz plot confidence interval
updated 10.5 years ago by ★ 1.6k • written 10.5 years ago by ▴ 40
2
votes
2
replies
2.4k
views
Ploting with NA values in Gviz (generic function from plot)
Gviz Plot NA graph Job
updated 10.5 years ago by 68k • written 10.5 years ago by ▴ 40
0
votes
2
replies
2.1k
views
Trouble with Ideogram Plots
Gviz ideogram
10.5 years ago rowlandsd • 0
0
votes
4
replies
2.9k
views
Gviz: plotting mean values of biological replicates
gviz
updated 10.5 years ago by ▴ 350 • written 10.5 years ago by • 0
0
votes
8
replies
3.0k
views
Gviz and AnnotateTrack and memory usage
gviz
updated 10.5 years ago by ★ 1.6k • written 11.0 years ago by ▴ 670
5
votes
14
replies
6.0k
views
gene symbols in Gviz
Gviz
10.5 years ago Bogdan ▴ 670
1
vote
9
replies
2.9k
views
Gviz IdeogramTrack Hsapiens/Mmusculus error
gviz
10.6 years ago Merienne Nicolas ▴ 120
2
votes
5
replies
2.8k
views
GVIZ shows error if plotting only one id
gviz
updated 10.6 years ago by • 0 • written 10.8 years ago by ▴ 80
0
votes
0
replies
1.1k
views
Gviz: Some of the DisplayPars don't work [rotation, ylim].
gviz
10.6 years ago gaospecial • 0
0
votes
1
reply
2.0k
views
Using European UCSC server in Gviz
Gviz UCSC
updated 10.6 years ago by ★ 1.6k • written 10.7 years ago by • 0
1
vote
2
replies
2.9k
views
How to control y-axis of DataTrack in Gviz
gviz
updated 10.6 years ago by ★ 1.6k • written 10.7 years ago by • 0
0
votes
3
replies
1.9k
views
Gviz: BiomartGeneRegionTrack error
Gviz Biomart gviz biomart
updated 10.6 years ago by ▴ 800 • written 10.6 years ago by ▴ 40
1
vote
1
reply
1.7k
views
gviz: error when plotting BiomartGeneRegionTrack with just.group="above"
gviz
updated 10.8 years ago by ▴ 750 • written 10.8 years ago by ▴ 80
1
vote
3
replies
4.1k
views
gviz: name of tracks disappeas
gviz
updated 10.8 years ago by ★ 1.6k • written 10.8 years ago by ▴ 80
0
votes
1
reply
1.7k
views
gviz: BiomartGeneRegionTrack throws an error
gviz biomart
updated 10.8 years ago by ★ 1.6k • written 10.8 years ago by ▴ 80
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