Showing : Plot • reset
0
votes
1
reply
908
views
part of the volcano plot does not appear.
plot volcano volcanoplot
updated 17 months ago by ▴ 780 • written 17 months ago by ▴ 10
0
votes
0
replies
485
views
maSigPro visualizing individually each plot from each cluster
plot maSigPro Clustering
23 months ago oseias.rf.junior • 0
0
votes
2
replies
4.1k
views
Gene body coverage plot
plot gene GenomicRanges Coverage R
updated 2.3 years ago by ▴ 20 • written 2.4 years ago by • 0
0
votes
0
replies
814
views
Gage pathway analysis of RNAseq graphical representation as dot plot
gage plot RNASeq goseq
updated 2.4 years ago by 42k • written 2.4 years ago by • 0
0
votes
0
replies
716
views
Problem with Plots or Graphics Device in the RStudio
NullDevice plot R
2.8 years ago Abdou-samad • 0
0
votes
4
replies
1.4k
views
AlignmentsTrack empty plot
Coverage RNASeq plot Gviz
updated 18 months ago by 66k • written 3.0 years ago by • 0
0
votes
0
replies
725
views
Gviz: set colors for UTRs
plot color Gviz utr
3.3 years ago ginlucks • 0
0
votes
2
replies
3.8k
views
Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘plotPCA’ for signature ‘"prcomp"’
plotGrouper DESeq2 plot
updated 3.5 years ago by ★ 4.2k • written 3.5 years ago by • 0
0
votes
1
reply
824
views
two tracks have the same axis
plot Gviz
3.7 years ago 腾 • 0
0
votes
1
reply
856
views
I am using the DEP package example dataset, and I am getting this error on: plot_frequency(data_se)
DEP R Bioconductor Plot
updated 3.7 years ago by 3.9k • written 3.7 years ago by • 0
1
vote
3
replies
1.9k
views
copy number variation analysis (CNV)
copynumber plot visualization NGS gene
updated 3.6 years ago by ▴ 210 • written 3.8 years ago by • 0
2
votes
2
replies
1.1k
views
[dba.plotvenn] Can I move around the numbers in the diagram so that they fit inside the overlapped region?
diffbind plot venn diagram
updated 3.8 years ago by ★ 5.2k • written 3.8 years ago by • 0
1
vote
2
replies
1.9k
views
clusterporfiler enrichGO plot
clusterprofiler gene ontology plot
updated 3.9 years ago by ▴ 40 • written 3.9 years ago by • 0
0
votes
9
replies
1.3k
views
Plotting change over time
deseq2 Plot
updated 4.3 years ago by 42k • written 4.3 years ago by • 0
0
votes
0
replies
747
views
Problems with cummeRbund
plot transcriptomics differential expression cummeRbund
4.3 years ago raquelponti • 0
0
votes
3
replies
1.6k
views
Change color of Diffbind's PCA and clustered heatmap plot()
DiffBind plot color
updated 4.5 years ago by ★ 5.2k • written 4.7 years ago by ▴ 10
0
votes
2
replies
991
views
Correlation plot how to improve?
plot correlation
4.8 years ago annkolman78 • 0
1
vote
2
replies
1.3k
views
Obtain the first gene expression heatmaps from GOexpress package gene ontology enrichment analysis results
GOexpress heatmap gene ontology plot
updated 4.8 years ago by ▴ 350 • written 4.8 years ago by • 0
0
votes
1
reply
1.1k
views
How to create a violin plot
plot ggcyte
updated 4.8 years ago by ★ 4.0k • written 4.8 years ago by • 0
0
votes
1
reply
847
views
Can we change the name of the ColAttributes in the image generated by dba.plotHeatmap?
DiffBind plot plotHeatmap dba.plotHeatmap
updated 4.9 years ago by ★ 5.2k • written 4.9 years ago by • 0
0
votes
2
replies
1.0k
views
Can we control colors for two different colAtributes
diffbind plot plotHeatmap
updated 4.9 years ago by ★ 5.2k • written 4.9 years ago by • 0
0
votes
5
replies
3.2k
views
How can I remove the row and column labels/names in the plot() or dba.plotHeatmap() while plotting correlation matrix using diffbind?
Diffbind plot heatmap.3
updated 4.9 years ago by ★ 5.2k • written 4.9 years ago by • 0
0
votes
1
reply
1.4k
views
SC3 how to customize plots ?
SC3 plot consensus marker heatmap
updated 5.6 years ago by ▴ 150 • written 5.7 years ago by • 0
0
votes
1
reply
928
views
plot get overridden rather to overlapped
rsamtools ggplot2 plot
updated 5.6 years ago by 66k • written 5.6 years ago by ▴ 10
0
votes
1
reply
3.0k
views
How can I create a mean ROC curve for multiple plotted ROC curves, R
R ROC mean plot multiple roc curves
updated 5.8 years ago by ▴ 420 • written 5.8 years ago by • 0
2
votes
2
replies
1.4k
views
Change legend names when using plotBCV
edger plot Tutorial
updated 6.0 years ago by 51k • written 6.0 years ago by • 0
2
votes
5
replies
1.8k
views
rlog, lfcShrink and vst on gene subset
deseq2 subsetting plot
updated 6.1 years ago by 42k • written 6.1 years ago by ▴ 10
0
votes
1
reply
2.3k
views
Plotting coverage from bam files
bam plot
updated 6.2 years ago by 66k • written 6.2 years ago by ▴ 40
0
votes
3
replies
1.3k
views
Adding gene names which are differentially expressed in the plot
edgeR plot differential gene expression
6.7 years ago fawazfebin ▴ 60
0
votes
0
replies
1.1k
views
Plotting DataTrack for non-model organism.
Gviz plot chipseq
6.9 years ago anupriyaverma1408 • 0
11
votes
15
replies
2.9k
views
edgeR - MDS Plot for Count Data
edger DEG mds plot
6.9 years ago baus87 • 0
2
votes
1
reply
986
views
Plotting Gene Expression Data From Multiple Batches
batch effect microarray plot
updated 7.0 years ago by ★ 2.0k • written 7.0 years ago by ▴ 90
0
votes
1
reply
1.6k
views
Save multiple plots into single pdf from Deseq2 analysis?
plot pdf dev.off
updated 7.1 years ago by ★ 13k • written 7.1 years ago by • 0
0
votes
6
replies
1.6k
views
expression correlation on an ExpressionSet
ExpressionSet caseControl Correlation Plot
updated 7.2 years ago by • 0 • written 7.5 years ago by ▴ 10
0
votes
1
reply
1.3k
views
ConsensusClusterPlus - function "calcICL" - How the samples are ordered in the plots???
ConsensusClusterPlus calcICL plot
7.7 years ago • updated 7.2 years ago juan-pablo.cerapio-arroyo ▴ 10
1
vote
2
replies
2.0k
views
Manhattan plot from ChAMP data
champ plot manhattan plot
updated 7.4 years ago by ▴ 90 • written 7.4 years ago by ▴ 10
1
vote
3
replies
3.0k
views
Combining LD matrix plot with SNP and gene data with ggplot / ggbio tracks() function
ggplot2 ggbio plot tracks bioconductor
updated 7.5 years ago by ★ 11k • written 7.5 years ago by ▴ 10
2
votes
4
replies
1.4k
views
ggbio tracks () does not allow "call" class in the "main" slot of the function
ggbio ggplot2 call plot
updated 7.6 years ago by ★ 11k • written 7.6 years ago by ▴ 10
1
vote
1
reply
1.7k
views
How to show chromosome position and SNP label at the same time in x axis
ggbio ggplot2 genomics plot
7.9 years ago oswaldo.lorenzo ▴ 10
2
votes
3
replies
1.8k
views
ggbio tracks() function handling x axis in the wrong way
ggbio ggplot2 tracks genomics plot
7.9 years ago oswaldo.lorenzo ▴ 10
0
votes
0
replies
1.1k
views
Plotting False discoveries vs genes selected
plot
8.0 years ago humberto_munoz • 0
4
votes
1
reply
2.1k
views
gviz: add horizontal line to DataTrack object
bioconductor gviz plot horizontal line
updated 8.0 years ago by ★ 1.6k • written 8.0 years ago by ▴ 10
2
votes
2
replies
1.4k
views
Anyone know how to make a plot like this - I don't even know what it's called.
plot ggplot2
updated 8.1 years ago by ▴ 130 • written 8.1 years ago by ▴ 10
0
votes
0
replies
1.1k
views
changing the plot type in minet package
minet plot
8.3 years ago Angel ▴ 40
1
vote
1
reply
1.5k
views
ggplot same data, different plots
ggplot2 ggplot plot
updated 8.5 years ago by 66k • written 8.5 years ago by ▴ 50
0
votes
0
replies
1.1k
views
GenomeGraphs, modify Y axis
genomegraphs biomart plot graphics
8.9 years ago koenhendriks89 • 0
1
vote
2
replies
1.6k
views
"confint" type in DataTrack function (Gviz)
Gviz plot confidence interval
updated 9.0 years ago by ★ 1.6k • written 9.0 years ago by ▴ 40
2
votes
2
replies
1.9k
views
Ploting with NA values in Gviz (generic function from plot)
Gviz Plot NA graph Job
updated 9.0 years ago by 66k • written 9.0 years ago by ▴ 40
0
votes
1
reply
1.5k
views
Ringo Plots Only Partially Made
Ringo affy tilingarray plot starr
9.0 years ago bruce.moran ▴ 30
0
votes
5
replies
2.1k
views
R plot error
r bioconductor graph plot data representation in graphical forms
9.1 years ago megha.24may • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: 'path' must be string by James W. MacDonald 66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string by cpierce2 • 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest by Robert • 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta by Guido Hooiveld ★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta by Michael Love 42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
Awards • All
Popular Question to Lluís Revilla Sancho ▴ 730
Popular Question to maltethodberg ▴ 180
Scholar to Michael Love 42k
Popular Question to Leonardo Collado Torres ★ 1.1k
Scholar to Gordon Smyth 51k
Locations • All
France, 16 minutes ago
WEHI, Melbourne, Australia, 36 minutes ago
Slovakia, 40 minutes ago
The city by the bay, 2 hours ago
Hong Kong, 3 hours ago
Traffic: 643 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6