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•
reset
0
votes
4
replies
1.8k
views
how to extract list in quantile in R
R
quantile
list
2.6 years ago
sat
• 0
1
vote
0
replies
3.0k
views
stuck on unimplemented type 'list' in 'EncodeElement'
list
save
dataframe
updated 3.3 years ago by
shepherl
4.2k • written 3.3 years ago by
orticello.1160797
▴ 10
0
votes
4
replies
2.0k
views
how to reformat complex list object (derived with TCGAbiolinks)?
TCGA
tcgabiolinks
list
reformat
7.8 years ago
Guido Hooiveld
★ 4.1k
3
votes
4
replies
4.4k
views
How to convert a DnaStringSet object to list of seq?
dnastringset
list
stringset
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
vinod.acear
▴ 50
1
vote
12
replies
2.9k
views
How can I integrate set of compressedList in multiple list into one without duplication?
r
iranges
findoverlaps
IntegerList
List
9.2 years ago • updated 8.9 years ago
jian_liangli
• 0
3
votes
5
replies
2.3k
views
How can I coerce "list" to S4 "List" (reproducible example is available)?
coercion
data manipulation
s4vectors
List
9.3 years ago
Jurat Shahidin
▴ 80
2
votes
3
replies
4.9k
views
Deseq2. Cluster of an specific list
deseq2
heatmap
clustering
file
list
updated 10.1 years ago by
Michael Love
43k • written 10.1 years ago by
chariko
• 0
4
votes
2
replies
4.3k
views
select keys from org.Mm.eg.db
org.mm.eg.db
select
list
updated 10.1 years ago by
James W. MacDonald
68k • written 10.1 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.4k
views
preferred mirrors list - permanently
mirror
preferred
list
updated 10.4 years ago by
Dan Tenenbaum
★ 8.2k • written 10.4 years ago by
lejeczek
▴ 10
0
votes
1
reply
1.5k
views
Mixing list from Piano package output
Piano
List
updated 10.5 years ago by
Leif Väremo
▴ 70 • written 10.5 years ago by
nonCodingGene
▴ 10
2
votes
4
replies
2.4k
views
summing integer RLE
rle
list
irange
grangeslist
updated 10.6 years ago by
Chris Seidel
▴ 80 • written 10.6 years ago by
gen
▴ 30
11 results • Page
1 of 1
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Replies
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…
Comment: Join BOC Sciences at Drug Discovery Chemistry
by
teamardigen
• 0
Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…
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Join BOC Sciences at Drug Discovery Chemistry
Drug datasets for RNA-seq
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
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