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2.2k

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R quantile list

3.0 years ago sat • 0

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3.3k

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list save dataframe

updated 3.7 years ago by shepherl 4.3k • written 3.7 years ago by orticello.1160797 ▴ 10

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2.2k

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TCGA tcgabiolinks list reformat

8.2 years ago Guido Hooiveld ★ 4.1k

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4.6k

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dnastringset list stringset

updated 8.7 years ago by Martin Morgan 25k • written 8.7 years ago by vinod.acear ▴ 50

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r iranges findoverlaps IntegerList List

9.6 years ago • updated 9.3 years ago jian_liangli • 0

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2.4k

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coercion data manipulation s4vectors List

9.7 years ago Jurat Shahidin ▴ 80

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deseq2 heatmap clustering file list

updated 10.5 years ago by Michael Love 43k • written 10.5 years ago by chariko • 0

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org.mm.eg.db select list

updated 10.5 years ago by James W. MacDonald 68k • written 10.5 years ago by Assa Yeroslaviz ★ 1.5k

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mirror preferred list

updated 10.8 years ago by Dan Tenenbaum ★ 8.2k • written 10.8 years ago by lejeczek ▴ 10

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Piano List

updated 10.9 years ago by Leif Väremo ▴ 70 • written 10.9 years ago by nonCodingGene ▴ 10

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rle list irange grangeslist

updated 10.9 years ago by Chris Seidel ▴ 80 • written 10.9 years ago by gen ▴ 30

11 results • Page 1 of 1

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Comment: Subsetting DDS object for individual conditions over time by A ▴ 60

Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…

Answer: Subsetting DDS object for individual conditions over time by ATpoint ★ 5.0k

It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…

Comment: GSEA error by Adithi • 0

Thank you so much. That makes perfect sense to me. I will work on this.

Comment: tximeta cannot open annotation gtf? by Michael Love 43k

Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…

Answer: tximeta cannot open annotation gtf? by ATpoint ★ 5.0k

> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…

Votes

Answer: RNA Seq using Lrt

Answer: DESeq2 LRT Reduced Formula

Answer: DESeq2: LRT or WALD guidance

Answer: GSEA error

Answer: OrgDb for maize

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