Bioconductor PCATools

Showing : PCATools • reset

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replies

211

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DESeq2 PCAtools

updated 10 days ago by Michael Love 42k • written 12 days ago by Aaliya • 0

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351

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DESeq2 RSTUDIO PCAtools

updated 12 days ago by swbarnes2 ★ 1.3k • written 13 days ago by Aaliya • 0

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389

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edgeR PCAtools

updated 5 weeks ago by Gordon Smyth 50k • written 5 weeks ago by Fabian • 0

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3.6k

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ellipse RNAseq PCAtools

updated 13 months ago by CP • 0 • written 3.0 years ago by elizabethe819 • 0

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1.2k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 15 months ago by Kevin Blighe ★ 3.9k • written 15 months ago by M Tuhin • 0

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957

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illumina PCAtools PCA

updated 17 months ago by Kevin Blighe ★ 3.9k • written 17 months ago by ilaria.debenedictis • 0

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865

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PCAtools bioconductor

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by pterry • 0

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1.2k

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PCAtools pcaExplorer pcaMethods

updated 22 months ago by Federico Marini ▴ 150 • written 22 months ago by m610110001 • 0

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2.5k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.1 years ago Alan • 0

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839

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PCAtools

3.1 years ago luca.s ▴ 50

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2.6k

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PCAtools

updated 3.3 years ago by Kevin Blighe ★ 3.9k • written 3.3 years ago by Terra • 0

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3.2k

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biplot PCA RNASeq PCAtools

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by mschmidt ▴ 10

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1.7k

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PCAtools biplot DESeq2 RNASeq PCA

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by ecg1g15 ▴ 20

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1.4k

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PCATools

updated 3.5 years ago by Kevin Blighe ★ 3.9k • written 3.6 years ago by oakhamwolf • 0

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1.6k

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EDA pcaExplorer PCAtools PCA

updated 2.4 years ago by Miguel ▴ 10 • written 3.7 years ago by k.vitting.seerup ▴ 120

15 results • Page 1 of 1

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Awards • All

Popular Question to WouterDeCoster ▴ 130

Scholar to Michael Love 42k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k