Bioconductor Boxplot

Showing : boxplot • reset

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1.7k

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boxplot microarray pd.hugene.2.0.st

9.0 years ago kanacska ▴ 10

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4.8k

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VST deseq2 boxplot rnaseq

updated 5.9 years ago by Michael Love 41k • written 5.9 years ago by Konstantinos Yeles ▴ 80

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2.0k

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edgeR boxplot

7.2 years ago snowru • 0

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2.0k

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gviz boxplot

updated 8.0 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.0 years ago by enricoferrero ▴ 660

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1.4k

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boxplot reads fastq sequencing rsubread

updated 4.9 years ago by Wei Shi ★ 3.6k • written 4.9 years ago by Raito92 ▴ 60

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661

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boxplot software error

updated 5.1 years ago by Gordon Smyth 50k • written 5.1 years ago by Raito92 ▴ 60

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974

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boxplot

updated 7.1 years ago by Peter Langfelder ★ 3.0k • written 7.1 years ago by farahqureshi5 • 0

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781

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knitr boxplot

updated 4.3 years ago by James W. MacDonald 65k • written 4.3 years ago by poojitha.stemcell ▴ 10

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561

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boxplot ggplot2

updated 14 months ago by ATpoint ★ 4.0k • written 14 months ago by Sooni ▴ 10

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4.5k

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affy package boxplot hgu133plus2 oligo package

updated 7.1 years ago by James W. MacDonald 65k • written 7.1 years ago by Javier Pérez Florido ▴ 840

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353

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t.test boxplot limma anova

17 days ago Chris • 0

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653

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boxplot affymetrix data diferential expression

5.1 years ago pratikshasharma47 • 0

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728

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affy boxplot

5.1 years ago pratikshasharma47 • 0

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994

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boxplot bioconductor R error

4.3 years ago l154359 • 0

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1.1k

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Rle boxplot

9.2 years ago Johannes Rainer ★ 2.0k

15 results • Page 1 of 1

Recent ...

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Comment: Deseq2. decontXcounts not integers. Useful alternative? by camp ▴ 10

Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…

Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Votes

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0