Bioconductor Cluster

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152

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clusterProfiler cluster

6 days ago • updated 5 days ago Yael • 0

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2.1k

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Network cluster WGCNA RNASeq

updated 9 months ago by James W. MacDonald 66k • written 9 months ago by chiwut.wong • 0

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1.4k

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cluster clusterProfiler KEGG

13 months ago • updated 12 months ago ruba-mahmoud • 0

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1.5k

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cluster OrgDb clusterProfiler

written 18 months ago by Chruut • 0

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622

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cluster qpcr qpcrNorm clusterProfiler HTqPCR

18 months ago Javier • 0

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1.5k

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scran Clustering SingleCellExperiment annotate cluster

updated 21 months ago by James W. MacDonald 66k • written 21 months ago by achoppe ▴ 10

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786

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RNASeq Clustering cluster WGCNA

2.1 years ago chiwut.wong • 0

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1.3k

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biomaRt R cluster

updated 3.8 years ago by Martin Morgan 25k • written 3.8 years ago by camerond • 0

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1.9k

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SingleCellExperiment cluster identities sce

updated 4.0 years ago by Aaron Lun ★ 28k • written 4.0 years ago by reinepapillon • 0

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727

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TCseq microwarray cluster counts normalization

4.8 years ago bioyas ▴ 10

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2.0k

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cluster mfuzz gene names

updated 8.2 years ago by Assa Yeroslaviz ★ 1.5k • written 8.2 years ago by thomas.dobrenel • 0

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1.2k

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quasr parallel cluster

8.3 years ago rna seq ▴ 90

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1.4k

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cluster

8.4 years ago niavarani ▴ 10

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4.4k

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cluster mclust limma clusplot kmeans

8.8 years ago svlachavas ▴ 830

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3.0k

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rnbeads gs ghostscript shared libraries cluster

8.8 years ago bmreilly • 0

15 results • Page 1 of 1

Recent ...

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Answer: Documenting resources in an `ExperimentHub` package? by James W. MacDonald 66k

The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…

Comment: ChAMP installation issue by shepherl 3.9k

We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…

Comment: How to arrange multiple plots into one page in NOISeq? by baptiste.bidon • 0

Hello everyone, I am new on this site but not a noob in R (I guess). I am facing the same problem. For me, it depends on the NOIseq plot fu…

Comment: ChAMP installation issue by Tahirah • 0

Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…

Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data by James W. MacDonald 66k

Yes, you can use `limma`.

Votes

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

Answer: Control group between 2 batches have different expression in RNAseq data

Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?

Awards • All

Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10