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News: List of Deprecated Package Bioc 3.9
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5.2 years ago shepherl 3.8k
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News: List of Deprecated Package Bioc 3.9
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5.3 years ago shepherl 3.8k
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News: Initial List of Deprecated Package Bioc 3.9
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updated 5.5 years ago by ★ 13k • written 5.5 years ago by 3.8k
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News: Final List of Deprecated Packages for Bioc3.8
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5.6 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc3.8
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News: List of Deprecated Packages for Bioc3.8
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5.9 years ago shepherl 3.8k
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News: Final List of Deprecated Packages for Bioc3.7
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written 6.1 years ago by 3.8k
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News: List of Deprecated Packages for Bioc3.7
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6.1 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc3.7
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6.2 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc3.7
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6.3 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc 3.7
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6.4 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc3.7
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News: Final List of Deprecated Packages for Bioc3.6
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6.6 years ago shepherl 3.8k
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News: List of Deprecated Packages for Bioc3.6
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6.6 years ago shepherl 3.8k
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News: Initial List of Deprecated Packages for Bioc3.6
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6.7 years ago shepherl 3.8k
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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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