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deprecation
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3
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18
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3.6k
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News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
16 months ago • updated 6 months ago
shepherl
4.1k
0
votes
2
replies
1.2k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
19 months ago • updated 17 months ago
shepherl
4.1k
1
vote
8
replies
1.7k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.6 years ago by
shepherl
4.1k
0
votes
2
replies
966
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
2.1 years ago • updated 2.0 years ago
shepherl
4.1k
0
votes
0
replies
897
views
Running deprecated packages
ToPASeq
Deprecation
2.5 years ago
pgauthi1
• 0
0
votes
4
replies
1.5k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
2.6 years ago • updated 2.1 years ago
shepherl
4.1k
0
votes
5
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
3.1 years ago • updated 2.6 years ago
shepherl
4.1k
2
votes
2
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.9 years ago • updated 3.5 years ago
shepherl
4.1k
0
votes
3
replies
1.2k
views
Which library now contains the ssdCoverage command that used to be found in the htseqtools package for R version 4.0.1 ?
Deprecation
chipseq
htseqtools
Bioconductor
updated 3.7 years ago by
Basti
▴ 780 • written 3.7 years ago by
Mick
• 0
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.7 years ago
shepherl
4.1k
0
votes
1
reply
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.8 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
5.0 years ago
shepherl
4.1k
0
votes
2
replies
2.0k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
5.1 years ago • updated 5.0 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
5.2 years ago • updated 5.1 years ago
shepherl
4.1k
0
votes
1
reply
1.2k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
5.3 years ago • updated 5.2 years ago
shepherl
4.1k
0
votes
3
replies
1.2k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
5.4 years ago
shepherl
4.1k
0
votes
1
reply
1.0k
views
News:
Initial List of Deprecated Packages Bioc 3.10
software
experimentdata
release
deprecation
annotation
News
5.5 years ago
shepherl
4.1k
17 results • Page
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Replies
Comment: Volcano plot has many values around zero
by
Michael Love
42k
It's positive over zero or nearly so.
Answer: Volcano plot has many values around zero
by
swbarnes2
★ 1.4k
You've got genes with supposedly have a 32-fold difference, and the adjusted p-values are < 1x10-10? That seems odd.
Comment: Volcano plot has many values around zero
by
mjun
• 0
Why this cluster close to 0 with low p value is so distinctive. Is this common? What does it mean and why? Thanks
Comment: Volcano plot has many values around zero
by
swbarnes2
★ 1.4k
I don't think this is evidence that the dataset is invalid. It's evidence that your experiment is underpowered, and/or your experimental c…
Comment: Differential Expression Analysis with unbalanced batches without replication bet
by
Gordon Smyth
51k
Have you read the totalVI documentation?, which says: > **Important** > We do not recommend using totalVI denoised values in other differ…
Votes
Comment: Weird looking volcano plot
Volcano plot has many values around zero
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
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