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genomeinfodbdata
•
reset
1
vote
3
replies
1.6k
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Non-zero exit status error when installing GenomeInfoDbData
DECIPHER
GenomeInfoDbData
Bioconductor
GenomeInfoDb
written 16 months ago by
dbjohnson7
• 0
2
votes
4
replies
1.6k
views
Help with infinite recursion - non-zero exit status in installation of GenomeInfoDbData
Install
GenomeInfoDbData
GenomeInfoDb
updated 19 months ago by
James W. MacDonald
68k • written 19 months ago by
Brandon
▴ 20
0
votes
1
reply
1.2k
views
GenomeInfoDbData version 1.2.9
GenomeInfoDbData
updated 2.2 years ago by
shepherl
4.2k • written 2.2 years ago by
remi.trimbour
• 0
6
votes
11
replies
3.4k
views
can't open mghp.osn.xsede.org
GenomeInfoDbData
genomeinfodbdata
updated 19 months ago by
merv
▴ 150 • written 2.4 years ago by
15753563659
▴ 80
8
votes
9
replies
2.2k
views
All three of the sites where genomeinfodbdata R packages are stored appear to be down.
GenomeInfoDbData
2.3 years ago
15753563659
▴ 80
0
votes
1
reply
2.5k
views
package ‘GenomeInfoDb’ could not be loaded
GenomeInfoDb
GenomeInfoDbData
updated 2.8 years ago by
ATpoint
★ 5.0k • written 2.8 years ago by
exferin
• 0
0
votes
3
replies
2.8k
views
I cannot install "microbiome"
GenomeInfoDbData
microbiome
phyloseq
updated 3.4 years ago by
Marcel Ramos
700 • written 3.4 years ago by
kikiki
• 0
0
votes
14
replies
6.3k
views
GenomeInfoDbData had non-zero exit status
DESeq2
RStudio
GenomeInfoDbData
hadnon-zeroexitstatus
updated 3.2 years ago by
wshao9
• 0 • written 3.4 years ago by
JoseR
• 0
1
vote
5
replies
2.2k
views
Unable to load mm10 genome for use with GenomicDistributions package
GenomeInfoDb
GenomeInfoDbData
GenomicDistributionsData
GenomicDistributions
3.5 years ago
rashford
• 0
0
votes
4
replies
2.7k
views
Cannot install Phyloseq and dada2
GenomeInfoDbData
phyloseq
dada2
3.9 years ago
ymtan
• 0
1
vote
4
replies
6.9k
views
GenomeInfoDb’ could not be loaded or installed
GenomeInfoDbData
4.7 years ago
ettore64
▴ 10
1
vote
7
replies
5.8k
views
installation of package ‘GenomeInfoDbData’ had non-zero exit status
GenomeInfoDbData
"GenomeInfoDbData"package
updated 3.8 years ago by
Hervé Pagès
16k • written 5.1 years ago by
N.D.Hubot
• 0
0
votes
2
replies
1.5k
views
Error when installing pcaExplorer
install
GenomeInfoDbData
updated 5.6 years ago by
James W. MacDonald
68k • written 5.6 years ago by
lina.bird
• 0
0
votes
0
replies
883
views
Error installing GenomeInfoDbData in order to run DESeq2
genomeinfodbdata
updated 6.8 years ago by
Martin Morgan
25k • written 6.8 years ago by
hdwhitti
• 0
0
votes
1
reply
2.3k
views
Issue using ballgown
software error
ballgown
genomeinfodbdata
genomeinfodb
updated 7.2 years ago by
James W. MacDonald
68k • written 7.3 years ago by
dualeahmed
• 0
0
votes
6
replies
2.1k
views
GenomeInfoDbData not available for Mac
bioconductor
GenomeInfoDbData
7.4 years ago
svetlana.gorokhova
• 0
1
vote
7
replies
20k
views
Dada2 and GenomeInfoDbData installation
dada2
GenomeInfoDbData
updated 8.5 years ago by
jiangjing_ing
• 0 • written 8.5 years ago by
navlern
• 0
17 results • Page
1 of 1
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Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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