Bioconductor Help

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HELP ChIC.data PeakDetection ChipOnChipData

19 months ago michela ▴ 20

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help DESeq2 DESeqDataSetFromMatrix rownames

updated 23 months ago by Sanatan • 0 • written 3.1 years ago by dorina.jamniczky • 0

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R deseq2 differential gene expression help

7.9 years ago fischer87 • 0

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DESeq2 HELP

15 months ago Michael • 0

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edger differential gene expression without replicate nested design help

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by knipehf • 0

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clusterprofiler input files error help

updated 7.2 years ago by Guangchuang Yu ★ 1.2k • written 7.2 years ago by Mataivic • 0

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RNASeqData RNASeq GEO RNASeqR HELP

3.1 years ago hgalmoore • 0

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STRINGdb HELP

updated 15 months ago by Rodrigo ▴ 10 • written 2.2 years ago by Jessica ▴ 10

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DESeq2 volcanoplot deseq HELP contrast

updated 15 months ago by Basti ▴ 780 • written 15 months ago by Michael • 0

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HELP HelloRanges

updated 19 months ago by James W. MacDonald 66k • written 19 months ago by michela ▴ 20

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limma help

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limma time series help

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by rm1238 • 0

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HELP ChIPpeakAnno

2.5 years ago lexi.kellington • 0

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ChIPpeakAnno Normalization EnrichedHeatmap HELP TxDb.Celegans.UCSC.ce11.refGene

19 months ago michela ▴ 20

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help software error

updated 5.4 years ago by Martin Morgan 25k • written 5.4 years ago by mafusa20 • 0

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HELP Data

updated 20 months ago by Guido Hooiveld ★ 4.0k • written 21 months ago by mcclurejenniferc • 0

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bachelorthesis help HELP

updated 9 months ago by DrFizz • 0 • written 9 months ago by melander • 0

17 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Thank you so much!

Answer: recount3 problem downloading data from source sra by Leonardo Collado Torres ★ 1.0k

Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…

Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman by minardsmitha ▴ 10

Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …

Answer: Documenting resources in an `ExperimentHub` package? by James W. MacDonald 66k

The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…

Comment: ChAMP installation issue by shepherl 3.9k

We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…

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Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data

Comment: Ensembl plants at annotationHub?

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

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Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10