Bioconductor Hg38

Showing : hg38 • reset

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2.2k

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rsubread ncbi GRCh38 hg38

updated 7.5 years ago by Wei Shi ★ 3.6k • written 7.5 years ago by jan.soderman • 0

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2.6k

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salmon hg38 tximport tx2gene.csv

updated 7.1 years ago by Michael Love 41k • written 7.1 years ago by seb.boegel • 0

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693

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hg38 genicannotations

updated 2.6 years ago by James W. MacDonald 65k • written 2.6 years ago by bundo • 0

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2.1k

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bsgenome hg38 r version 3.1.2

updated 8.6 years ago by James W. MacDonald 65k • written 8.6 years ago by kylvalda • 0

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2.4k

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edaseq normalization hg38 biomart org.db

updated 6.4 years ago by davide risso ▴ 950 • written 6.4 years ago by mark.ebbert • 0

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985

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annotation genome hg38 TxDb.Hsapiens.UCSC.hg38.knownGene BSgenome.Hsapiens.UCSC.hg38

updated 4.2 years ago by kayla.interdonato ▴ 160 • written 4.2 years ago by jam526 • 0

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1.0k

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Annotation variation HG38

updated 3.5 years ago by James W. MacDonald 65k • written 3.5 years ago by Emanuele • 0

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362

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SeqSQC hg38

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by isml2688 • 0

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1.5k

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featurecounts hg38

6.9 years ago raf4 ▴ 20

9 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length