Bioconductor Linux

Showing : linux • reset

votes

replies

3.4k

views

Linux R tximport

3.8 years ago • updated 3.7 years ago nakane_clan • 0

votes

replies

6.0k

views

biomart linux

updated 5.0 years ago by Martin Morgan 25k • written 7.6 years ago by christopher.mcfall • 0

vote

replies

1.9k

views

DEXSEq Linux

updated 6.6 years ago by Alejandro Reyes ★ 1.9k • written 6.6 years ago by justinkablan225 ▴ 10

votes

1.5k

views

ChemmineOB Linux Installation

6.7 years ago jandrosavich • 0

votes

replies

6.8k

views

DESEq2 R linux RcppArmadillo

6.8 years ago RS1 • 0

votes

replies

1.5k

views

bioinformatician job Linux NGS Job

7.0 years ago l.brown ▴ 10

votes

replies

1.7k

views

python bio ngs linux Job

7.7 years ago EMBL Recruitment • 0

vote

replies

1.9k

views

biocparallel oligo rma linux parallel

7.9 years ago s.munster ▴ 40

votes

1.8k

views

R h5ls windows linux

updated 8.0 years ago by Mike Smith ★ 6.6k • written 8.2 years ago by maxime.fortin • 0

vote

replies

2.6k

views

linux rsubread installation

updated 8.4 years ago by Mike Smith ★ 6.6k • written 8.4 years ago by hjmangalam • 0

votes

replies

2.9k

views

Bioconduct or Chipseeker CentOS7 Linux installation

updated 9.1 years ago by Guangchuang Yu ★ 1.2k • written 9.1 years ago by spsp9987 • 0

votes

replies

3.5k

views

Rcpp genefo linux linux mint Rstudio

updated 9.3 years ago by mfox • 0 • written 9.3 years ago by anjali.krishna1008 • 0

votes

1.7k

views

linux r phylogenetic computational biology

updated 10.4 years ago by Hervé Pagès 16k • written 10.4 years ago by guilherme • 0

votes

1.5k

views

linux R server

updated 11.2 years ago by James W. MacDonald 68k • written 11.2 years ago by Matthew McCormack ▴ 180

14 results • Page 1 of 1

Recent ...

Replies

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Answer: p.adjust BH Question by Gordon Smyth 53k

Duplicate of https://support.bioconductor.org/p/41077/

Answer: Large logFC but somewhat high FDR by Gordon Smyth 53k

Glad you're getting good use out of the package. The results that you show seem pretty much as one would expect, with nothing surprising. …

Votes

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

A: p.adjust BH generates duplicate values

Awards • All