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linux
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tximport ERROR : all(file.exists(files)) is not TRUE
Linux
R
tximport
2.2 years ago
nakane_clan
• 0
0
votes
4
replies
4.3k
views
Problems Installing biomaRt
biomart
linux
updated 3.4 years ago by
Martin Morgan
25k • written 6.0 years ago by
christopher.mcfall
• 0
1
vote
6
replies
1.3k
views
How to install DEXSeq on R 3.4.4
DEXSEq
Linux
updated 5.0 years ago by
Alejandro Reyes
★ 1.9k • written 5.0 years ago by
justinkablan225
• 0
0
votes
1
reply
986
views
ChemmineOB Installation RHEL
ChemmineOB
Linux
Installation
5.1 years ago
jandrosavich
• 0
0
votes
2
replies
5.3k
views
[Resolved] RcppArmadillo pckg ERRORS : non-zero exit status (and so DESeq2 also)
DESEq2
R
linux
RcppArmadillo
5.2 years ago
RS1
• 0
0
votes
0
replies
988
views
Job:
Bioinformatician ('CHBIO15) (m/f)
bioinformatician job
Linux
NGS
Job
5.4 years ago
l.brown
▴ 10
0
votes
0
replies
1.2k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
6.1 years ago
EMBL Recruitment
• 0
1
vote
0
replies
1.4k
views
Problems running oligo functions in parallel on a linux computer
biocparallel
oligo
rma
linux
parallel
6.3 years ago
s.munster
▴ 40
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.5 years ago by
Mike Smith
★ 6.5k • written 6.6 years ago by
maxime.fortin
• 0
1
vote
4
replies
2.1k
views
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
linux
rsubread
installation
updated 6.8 years ago by
Mike Smith
★ 6.5k • written 6.8 years ago by
hjmangalam
• 0
0
votes
6
replies
2.3k
views
Chipseeker is unavabile on Linux CentOS7 ?
Bioconduct or
Chipseeker
CentOS7
Linux
installation
updated 7.5 years ago by
Guangchuang Yu
★ 1.2k • written 7.5 years ago by
spsp9987
• 0
0
votes
4
replies
2.8k
views
Unable to install Rcpp package for genefo
Rcpp
genefo
linux
linux mint
Rstudio
updated 7.7 years ago by
mfox
• 0 • written 7.7 years ago by
anjali.krishna1008
• 0
0
votes
1
reply
1.2k
views
R slow, using all physical memory and 20GB Virt
linux
r
phylogenetic
computational biology
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
guilherme
• 0
3
votes
1
reply
1.2k
views
best server maintenance practices
linux
R
server
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
Matthew McCormack
▴ 180
14 results • Page
1 of 1
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Replies
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Votes
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
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