Bioconductor Mac os x

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R lpsymphony mac os x

updated 5.9 years ago by Wolfgang Huber ★ 13k • written 6.0 years ago by tohsumi • 0

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tcgabiolinks tcga cnv mac os x gaia

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GO bioclite R3.5 mac os x annotationdbi

updated 6.4 years ago by Martin Morgan 25k • written 6.4 years ago by Jens Preussner ▴ 30

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package installation mac os x

updated 6.6 years ago by Martin Morgan 25k • written 6.6 years ago by brt381 • 0

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software error rcellminer rjava mac os x

7.3 years ago zayed.albertyn • 0

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bplapply multicoreParam mac os x

8.1 years ago • updated 8.0 years ago gmerino ▴ 20

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R sbml rsbml mac os x

8.5 years ago resuper ▴ 10

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minfi minfidata rgl. mac os x el capitan

updated 8.5 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.5 years ago by holbrookjoanna • 0

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s4vectors mac os x deseq

updated 8.7 years ago by Wolfgang Huber ★ 13k • written 8.7 years ago by yoonsora • 0

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seq2pathway error python mac os x

9.1 years ago termanini ▴ 10

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Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Comment: How many of my genes from my gene list are in each KEGG pathway? by josephasmith1310 • 0

> You can compare the number in the column setSize versus the number of > genes in core_enrichment. The former corresponds to the number of…

Comment: EuroBioC2024 abstract submission is open! by Esperan • 0

Great information about the EuroBioC2024 conference! https://openreview.net/group?id=bioconductor.org/EuroBioC/2024/Conferences [slope](htt…

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k

I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…

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Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

A: p.adjust BH generates duplicate values

Answer: Adjusted p-values become NA when sub-setting samples

Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice

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