Showing : methylationEPIC • reset
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Beta values and M values cluster differently
methylationEPIC minfi microarray epigenetics EPIC
6.7 years ago firestar ▴ 20
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1.1k
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Best normalisation method
microarray methylationEPIC epigenetics minfi EPIC
6.7 years ago firestar ▴ 20
3
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6
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2.7k
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could not find function "champ.load"
ChAMP champ 2.9.10 methylationepic
7.6 years ago david.ch • 0
0
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1.4k
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differential methylation analysis with RnBeads
rnbeads methylation methylationepic dna methylation
7.7 years ago gabrielrfries • 0
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1
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2.4k
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ChAMP Methylation analysis error code "could not find function champ.load"
champ methylationepic
updated 7.8 years ago by ▴ 290 • written 7.8 years ago by • 0
3
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4.0k
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Error while using champ.svd() function in subset of data
ChAMP methylationepic epicarray epigenomics
updated 8.1 years ago by ▴ 140 • written 8.1 years ago by ▴ 10
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1.2k
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Error when changing the database for minfi dropLociWithSnps
minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP
8.3 years ago Ellen O • 0
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2
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2.9k
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Illumina methylationEPIC demo data in IDAT format?
methylation illumina EPIC methylationepic idat
updated 8.5 years ago by ★ 4.1k • written 8.5 years ago by • 0
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4
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2.2k
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minfi "mapToGenome" dimension error
methylation epic microarray minfi methylationepic
8.7 years ago nhejazi • 0
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1.4k
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Shinymethyl 850K Array quality control signal cutoffs
shinymethyl minfi epic microarray methylationepic qualitycontrol
8.7 years ago chelsey.ju • 0
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3
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2.2k
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MINFI missing samples in qcreports and densityplots
minfi illumina methylationEPIC densityplot
8.8 years ago annabelle.congras ▴ 10
11 results • Page 1 of 1
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Comment: VariantAnnotation does escape = within header string quotes by Daniel Cameron ▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data by Alexander • 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Comment: featureCounts -L: high unassigned:mapq fraction by eja.gssssssse.r.m • 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Kevin Blighe ★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Answer: VariantAnnotation does escape = within header string quotes by Kevin Blighe ★ 4.0k
Hi, Thanks for the minimal reproduction - this is very clear and confirms a bug in `VariantAnnotation::writeVcf()`. The issue is that th…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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