Showing : minfi • reset
6
votes
5
replies
6.0k
views
minfi support of illumina Infinium methylationEPIC v2.0
methylationEPICv2.0 minfi
updated 6 months ago by ▴ 10 • written 13 months ago by ▴ 50
0
votes
11
replies
3.8k
views
bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype arguments
DMRcate minfi
updated 3 months ago by ▴ 180 • written 7.1 years ago by ★ 2.0k
0
votes
9
replies
3.1k
views
clarification about bumphunter value output
minfi bumphunter
updated 11 months ago by • 0 • written 6.2 years ago by • 0
0
votes
14
replies
2.0k
views
Error while preprocessing raw data from methylation array using minfi package
minfi
updated 3 months ago by • 0 • written 8 months ago by • 0
0
votes
2
replies
1.4k
views
Error processing Infinium 450K Methylation data using Minfi
minfi software error methylation illumina450k
updated 11 months ago by • 0 • written 8.4 years ago by • 0
2
votes
6
replies
1.4k
views
How to get DMR for Infinium methylation EPIC v2
ChAMP DMRcate minfi
updated 5 weeks ago by ▴ 180 • written 5 months ago by ▴ 10
0
votes
3
replies
952
views
Batch correction using control probes in EPIC array data
RnBeads minfiData minfi EPICarray
updated 12 months ago by ▴ 780 • written 12 months ago by ▴ 10
0
votes
5
replies
936
views
minfi, limma, adjusting for cell counts - integrating the resoults of estimateCellCounts into the linear regression model
minfi limma
6 months ago dorota.komar • 0
0
votes
2
replies
676
views
minfi differential methylation analysis errors
minfi
6 months ago matthew.sinton • 0
0
votes
2
replies
577
views
ageData (minfi pipeline)
ageData missMethyl differentialvariability minfi
updated 6 weeks ago by • 0 • written 12 months ago by • 0
0
votes
3
replies
572
views
minfi bumphunter - probe IDs
minfi bumphunter
updated 7 months ago by ▴ 780 • written 7 months ago by • 0
0
votes
2
replies
566
views
EPIC array hg38 annotation?
minfi DMRcate
3 months ago • updated 12 weeks ago mycetes • 0
0
votes
7
replies
470
views
error in reading idat files and creating rgset
minfi MethylationArray
updated 12 weeks ago by 65k • written 12 weeks ago by • 0
3
votes
2
replies
469
views
What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)"?
SBE CpG minfi CpGinterrogation
5 months ago • updated 4 months ago kyj2226 • 0
0
votes
1
reply
402
views
Two EPIC Methylation Array Analysis Questions
minfiDataEPIC minfi
updated 8 months ago by 65k • written 8 months ago by • 0
0
votes
1
reply
335
views
Error in reading my csv file in minfi
minfiDataEPIC minfi
updated 5 months ago by ▴ 780 • written 5 months ago by • 0
0
votes
0
replies
268
views
Normalization in methylation analysis
Methylation minfi preprocessQuantile MethylationArrayData preprocessFunnorm
4 months ago kyj2226 • 0
0
votes
4
replies
255
views
Minfi - estimatecellscount
min minfi
updated 10 days ago by 65k • written 5 weeks ago by • 0
1
vote
4
replies
213
views
minfi::read.metharray.exp
minfiData minfi
updated 16 days ago by ▴ 780 • written 17 days ago by • 0
0
votes
0
replies
201
views
Can MethylationEPIC v1 and v2 data be used together for analysis with minfi?
minfi minfiDataEPIC
9 weeks ago Felix • 0
0
votes
1
reply
184
views
Matrix multiplication error to estimate telomere length
methylclockData minfi methylclock minfidata
updated 10 weeks ago by 65k • written 10 weeks ago by • 0
1
vote
1
reply
96
views
minfi latest update for EPIC V2 chip
minfi minfiDataEPIC
updated 2 days ago by 65k • written 3 days ago by • 0
22 results • Page 1 of 1
Recent ...
Replies
Answer: Differential gene expression analysis results by ATpoint ★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results by sajadahmad41454 • 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Comment: deseq2 results by swbarnes2 ★ 1.4k
It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Dylan.Sheerin • 0
Thank you very much, Gordon. I'll give voomLmFit a go!
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie by Gordon Smyth 50k
Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…
Votes
Comment: deseq2 results
Comment: deseq2 results
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
Bioconductor 3.19 is Released!
Awards • All
Popular Question to Pietro ▴ 40
Popular Question to neilzhao ▴ 30
Popular Question to ATpoint ★ 4.1k
Teacher to Michael Love 42k
Popular Question to Haibo Liu • 0
Locations • All
Egypt, 1 minute ago
France, 1 minute ago
Germany, 4 minutes ago
Germany, 31 minutes ago
Germany, 45 minutes ago
Traffic: 799 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6