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minfiData
•
reset
1
vote
2
replies
792
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normalizatino of dna methylation EPIC data
DNA
minfiData
minfiDataEPIC
DNAMethylation
minfi
8 months ago
user_bioinfo
• 0
0
votes
1
reply
733
views
minfi - bumphunter value problem
bumphunter
minfiData
minfi
bumphun
updated 15 months ago by
James W. MacDonald
68k • written 16 months ago by
kumakeren16
• 0
1
vote
4
replies
889
views
minfi::read.metharray.exp
minfiData
minfi
updated 18 months ago by
Basti
▴ 780 • written 18 months ago by
clacarion
• 0
0
votes
1
reply
653
views
Matrix multiplication error to estimate telomere length
methylclockData
minfi
methylclock
minfidata
updated 20 months ago by
James W. MacDonald
68k • written 20 months ago by
sharangiiv
• 0
0
votes
3
replies
1.8k
views
Batch correction using control probes in EPIC array data
RnBeads
minfiData
minfi
EPICarray
updated 2.5 years ago by
Basti
▴ 780 • written 2.5 years ago by
Jitendra
▴ 10
0
votes
4
replies
1.9k
views
Sex estimation problems in [estimateCellCounts]: methylation arrays
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
updated 2.7 years ago by
James W. MacDonald
68k • written 2.7 years ago by
Grace
• 0
0
votes
5
replies
2.3k
views
minfi error read.metharray.exp
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
written 2.7 years ago by
Grace
• 0
0
votes
0
replies
1.3k
views
Error in champ.svd - function 'EstDimRMTv2' within champ.svd acting inconsistently?
minfiData
ChAMP
3.8 years ago
behr201
• 0
0
votes
0
replies
1.2k
views
minfi - estimateCellCounts2-proportions sum more than 1
minfi
minfiData
MethylationArrayData
4.2 years ago
ponche_de_kiwi
• 0
1
vote
1
reply
2.9k
views
plotSex error message
minfiData
plotsex
minfi
minfiDataEPIC
r
updated 4.7 years ago by
suman
• 0 • written 4.7 years ago by
Bethan
• 0
1
vote
2
replies
2.5k
views
Minfi read.metharray.sheet error
minfi
methylation
dataimport
minfidata
missmethyl
updated 7.1 years ago by
James W. MacDonald
68k • written 7.1 years ago by
moldach
▴ 20
0
votes
1
reply
1.8k
views
Problem loading minfi on macOS
minfi
minfidata
rgl.
mac os x
el capitan
updated 9.5 years ago by
Kasper Daniel Hansen
★ 6.5k • written 9.5 years ago by
holbrookjoanna
• 0
0
votes
1
reply
2.7k
views
Analyzing 450k Methylation from TCGA Website
minfidata
minfi
illuminahumanmethylation450k.db
illuminahumanmethylation450kanno.ilmn12.hg19
10.6 years ago
alejandretheodore
• 0
0
votes
2
replies
2.4k
views
Help resovling"Error in lm.fit" with 'dmpFinder' function in minfi
minfi
minfidata
illumina
methylation
dmpfinder
updated 11.1 years ago by
James W. MacDonald
68k • written 11.1 years ago by
michael.zulyniak
• 0
14 results • Page
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Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Monkey Mart: The Ultimate Gaming Marketplace Experience https://monkeymart.one/
Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Enter the world of Monkey Mart, where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trad…
Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Enter the world of , where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trade and conne…
Comment: copy number/LOH for Affy 100K
by
igkryycpinmshzugby
• 0
Hi John For copy number and LOH analysis from Affymetrix 100K SNP arrays you can use aroma.affymetrix or CRLMM packages in Bioconductor. …
Comment: Integration: Paired-end vs healthy single-end from a different source
by
igkryycpinmshzugby
• 0
Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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