Bioconductor Pcatools

Showing : pcatools • reset

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281

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COTAN PCAtools

12 months ago Silvia • 0

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1.2k

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DESeq2 eigencorplot PCAtools

20 months ago BioinfGuru ▴ 70

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790

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DESeq2 PCAtools

updated 21 months ago by Michael Love 43k • written 21 months ago by Aaliya • 0

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2.9k

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DESeq2 RSTUDIO PCAtools

updated 21 months ago by swbarnes2 ★ 1.4k • written 21 months ago by Aaliya • 0

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2.5k

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edgeR PCAtools

written 22 months ago by Fabian • 0

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6.5k

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ellipse RNAseq PCAtools

updated 2.8 years ago by CP • 0 • written 4.7 years ago by elizabethe819 • 0

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2.1k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 3.0 years ago by Kevin Blighe ★ 4.0k • written 3.0 years ago by M Tuhin • 0

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2.1k

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illumina PCAtools PCA

updated 3.2 years ago by Kevin Blighe ★ 4.0k • written 3.2 years ago by ilaria.debenedictis • 0

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1.3k

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PCAtools bioconductor

updated 3.5 years ago by James W. MacDonald 68k • written 3.5 years ago by pterry • 0

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2.5k

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PCAtools pcaExplorer pcaMethods

updated 3.6 years ago by Federico Marini ▴ 180 • written 3.6 years ago by m610110001 • 0

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4.5k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

3.8 years ago Alan • 0

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1.5k

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PCAtools

4.8 years ago luca.s ▴ 50

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4.1k

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PCAtools

updated 5.0 years ago by Kevin Blighe ★ 4.0k • written 5.0 years ago by Terra • 0

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4.7k

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biplot PCA RNASeq PCAtools

updated 5.1 years ago by Kevin Blighe ★ 4.0k • written 5.1 years ago by mschmidt ▴ 10

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2.6k

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PCAtools biplot DESeq2 RNASeq PCA

updated 5.2 years ago by Kevin Blighe ★ 4.0k • written 5.2 years ago by ecg1g15 ▴ 30

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2.2k

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PCATools

updated 5.3 years ago by Kevin Blighe ★ 4.0k • written 5.3 years ago by oakhamwolf • 0

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2.6k

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EDA pcaExplorer PCAtools PCA

updated 4.1 years ago by Miguel ▴ 20 • written 5.4 years ago by k.vitting.seerup ▴ 120

17 results • Page 1 of 1

Recent ...

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Votes

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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