Bioconductor Pcatools

Showing : pcatools • reset

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208

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DESeq2 PCAtools

updated 9 days ago by Michael Love 41k • written 11 days ago by Aaliya • 0

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346

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DESeq2 RSTUDIO PCAtools

updated 11 days ago by swbarnes2 ★ 1.3k • written 12 days ago by Aaliya • 0

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386

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edgeR PCAtools

updated 5 weeks ago by Gordon Smyth 50k • written 5 weeks ago by Fabian • 0

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1.2k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 15 months ago by Kevin Blighe ★ 3.9k • written 15 months ago by M Tuhin • 0

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955

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illumina PCAtools PCA

updated 17 months ago by Kevin Blighe ★ 3.9k • written 17 months ago by ilaria.debenedictis • 0

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861

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PCAtools bioconductor

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by pterry • 0

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1.2k

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PCAtools pcaExplorer pcaMethods

updated 22 months ago by Federico Marini ▴ 150 • written 22 months ago by m610110001 • 0

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2.5k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.1 years ago • updated 2.0 years ago Alan • 0

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3.6k

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ellipse RNAseq PCAtools

updated 13 months ago by CP • 0 • written 3.0 years ago by elizabethe819 • 0

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838

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PCAtools

3.1 years ago luca.s ▴ 50

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2.6k

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PCAtools

updated 3.3 years ago by Kevin Blighe ★ 3.9k • written 3.3 years ago by Terra • 0

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3.2k

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biplot PCA RNASeq PCAtools

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by mschmidt ▴ 10

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1.7k

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PCAtools biplot DESeq2 RNASeq PCA

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by ecg1g15 ▴ 20

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1.4k

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PCATools

updated 3.5 years ago by Kevin Blighe ★ 3.9k • written 3.5 years ago by oakhamwolf • 0

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1.6k

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EDA pcaExplorer PCAtools PCA

updated 2.4 years ago by Miguel ▴ 10 • written 3.7 years ago by k.vitting.seerup ▴ 120

15 results • Page 1 of 1

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Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k