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Recent ...
Replies
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
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I refered you to the DiffVar package 11 months ago. Did you consider it?
Your clarification makes it clear that your issue is not with lim…
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
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Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details.
We're interested i…
Answer: How does contrasts.fit do in limma to extract comparisons with a model having in
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The limma Users Guide explains how to test for interactions or to test for contrasts very easily.
limma can work with any design matrix, bu…
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You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
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In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
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