Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
rlelist
•
reset
1
vote
4
replies
1.1k
views
fast apply on RleList
GenomicRanges
RleList
7 months ago
story.benjamin
▴ 20
1
vote
2
replies
1.4k
views
How to apply a function to a RleViesList object?
Views
IRanges
GRanges
RleList
updated 4.1 years ago by
Mike Smith
★ 6.6k • written 4.1 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
1.4k
views
Avoid rotating vector when doing arithmetic on different length IRanges RleList entries
iranges
s4vectors
rle
rlelist
7.4 years ago
endrebak85
▴ 40
3
votes
2
replies
2.5k
views
coverage() output SimpleRleList cannot be converted to GRanges
bug
genomicranges
granges
rlelist
coverage
updated 7.8 years ago by
Hervé Pagès
16k • written 7.8 years ago by
xiaotong.yao23
▴ 10
7
votes
4
replies
2.2k
views
From RleList to RleArray
delayedarray
rlelist
rle
updated 8.1 years ago by
Peter Hickey
▴ 760 • written 8.1 years ago by
davide risso
▴ 980
6
votes
6
replies
2.2k
views
Implementing fast mathematical and statistical operations on genomic variables in bioconductor
genomicranges
biocgenerics
rlelist
genomicvars
iranges
updated 8.2 years ago by
Hervé Pagès
16k • written 8.2 years ago by
Devin King
▴ 20
0
votes
1
reply
1.4k
views
Replacing values in an RleList
rlelist
ifelse
updated 8.9 years ago by
theobroma22
▴ 10 • written 8.9 years ago by
maltethodberg
▴ 180
0
votes
1
reply
1.7k
views
Views with RleLists and IRangesLists
Views
genomicalignments
IRangesList
coverage
RleList
updated 9.3 years ago by
Hervé Pagès
16k • written 9.3 years ago by
ccanchaya
• 0
8 results • Page
1 of 1
Recent ...
Replies
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much, @ATpoint and @kevin , for your valuable insights. I have carefully checked all your suggestions. First, I examined th…
Answer: Finding duplicated entries in GRangesList
by
Kevin Blighe
★ 4.0k
The duplicated and unique functions operate element-wise on GRangesList objects. This means that they apply the respective function to each…
Answer: DESeq2 on non-RNASeq counts data
by
Kevin Blighe
★ 4.0k
The use of DESeq2 for count data from artificial sequences is acceptable, as the program models counts via a negative binomial distribution…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …
Votes
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Awards
• All
Scholar
to
Gordon Smyth
53k
Popular Question
to
shepherl
4.2k
Supporter
to
fabio.marroni
• 0
Popular Question
to
Guido Hooiveld
★ 4.1k
Popular Question
to
James W. MacDonald
68k
Locations
• All
Pittsburgh, United States,
6 minutes ago
Germany,
12 minutes ago
United States,
36 minutes ago
United States,
1 hour ago
United States,
1 hour ago
Traffic: 779 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6