Showing : survival • reset
0
votes
0
replies
293
views
plots in gwasurvivr
gwasurvivr r survival cox
2.3 years ago laura.martinez.campelo • 0
0
votes
6
replies
2.0k
views
Issues installing DESeq2, installation path not writable, package: survival
deseq2 survival
updated 9 weeks ago by • 0 • written 2.6 years ago by • 0
1
vote
0
replies
713
views
How to compute 95%CI after having C-index value?
survival nomogram cph 95CI
3.0 years ago huynguyen96.dnu ▴ 20
0
votes
0
replies
379
views
Estimating survival function with left truncation?
Icens Survival Left-truncation Interval-Censored
updated 3.5 years ago by 25k • written 3.5 years ago by • 0
3
votes
7
replies
2.7k
views
DESeq2 for survival analysis
deseq2 survival rlog transformation
5.2 years ago array chip ▴ 420
0
votes
0
replies
797
views
Need help determine optimal argument value on a rbsurv model
rbsurv microarray survival
5.3 years ago JackieMe • 0
2
votes
1
reply
1.1k
views
error/warning message while doing kmTCGA survival plot
RTCGA survival kmTCGA
updated 5.8 years ago by ▴ 10 • written 5.8 years ago by ▴ 30
0
votes
0
replies
626
views
Error with Reportingtools using ENSEMBL gene ID
reporting tools modifyDF survival
6.6 years ago cagenet34 ▴ 20
0
votes
1
reply
1.1k
views
simpleaffy segmentation fault
Survival probe genefilter affy affyio Survival probe genefilter affy affyio
updated 7.7 years ago by • 0 • written 16.1 years ago by ▴ 170
0
votes
1
reply
2.3k
views
CanceR: Survival plots
cancer gui survival Kaplan-Meier
7.8 years ago • updated 7.7 years ago kmezhoud ▴ 10
0
votes
1
reply
1.3k
views
[R] freetype 2.5.2, problem with the survival package, build R 2.15.x with gcc 4.8.x
Regression Survival snpStats Regression Survival snpStats
9.1 years ago David Winsemius ▴ 40
0
votes
2
replies
3.9k
views
Problem installing \'survival\' package/ Fix request + other options?
Survival Survival
updated 9.5 years ago by 62k • written 9.5 years ago by ★ 12k
0
votes
1
reply
1.3k
views
Fwd: feature weights in 'superpc' package
Survival ASSIGN Survival ASSIGN
updated 9.7 years ago by ★ 4.2k • written 9.7 years ago by ▴ 10
0
votes
10
replies
1.7k
views
assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray Annotation GO Network Regression Survival Infrastructure Escherichia coli ROC
9.9 years ago Julie Zhu ★ 4.3k
0
votes
0
replies
2.8k
views
ComBat
Transcription Genetics Pathways Network Survival Cancer Breast Colon Kidney Leukemia HIV
10.2 years ago SSc Array Core ▴ 10
0
votes
1
reply
3.1k
views
undefined columns selected error when using bagging{ipred}
Survival Survival
updated 10.4 years ago by ★ 6.7k • written 10.4 years ago by ★ 12k
0
votes
2
replies
1.4k
views
Kaplan Meier curve
Survival Survival
updated 10.6 years ago by ★ 2.0k • written 10.6 years ago by ▴ 200
0
votes
0
replies
1.9k
views
survival prediction from multiple genes
Survival Ovarian Survival Ovarian
10.9 years ago Ahmet ZEHIR ▴ 50
0
votes
0
replies
794
views
MLInterfaces, CMA, or Caret for censored survival?
Survival Survival
11.0 years ago Levi Waldron ▴ 10
0
votes
0
replies
714
views
globaltest 5.6.1 bug fix
Survival globaltest Survival globaltest
11.5 years ago Goeman, J.J. MSTAT ▴ 150
0
votes
1
reply
972
views
cox PH model - KM curve
Survival phenoTest Survival phenoTest
updated 11.6 years ago by ★ 2.0k • written 11.6 years ago by ▴ 330
0
votes
3
replies
1.5k
views
[Bioc-sig-seq] Bioconductor 2.8 is released
SNP Sequencing miRNA Microarray Annotation Normalization Pathways Preprocessing Survival
updated 11.8 years ago by ▴ 310 • written 11.8 years ago by ★ 8.2k
0
votes
0
replies
730
views
booklet on using R for biomedical statistics
Survival Survival
12.1 years ago Coghlan, Avril ▴ 190
0
votes
0
replies
753
views
globaltest 5.0.2
Survival globaltest Survival globaltest
13.0 years ago Goeman, J.J. MSTAT ▴ 150
0
votes
0
replies
744
views
2009 Courses***R/S-PLUS Advanced & Fundamentals - January 2009. Also check out our New&Emerging Courses.
Clustering Survival Clustering Survival
14.1 years ago sue@xlsolutions-corp.com ▴ 570
0
votes
1
reply
1.9k
views
forward conditional Cox and logistic regression
Genetics Regression Survival Genetics Regression Survival
updated 14.1 years ago by ★ 2.3k • written 14.1 years ago by ▴ 130
0
votes
2
replies
952
views
applying coxfilter after LIMMA
Survival Cancer limma Survival Cancer limma
updated 14.2 years ago by 62k • written 14.2 years ago by ▴ 330
0
votes
3
replies
1.6k
views
gene expression data followup
Survival Cancer Survival Cancer
updated 14.2 years ago by 62k • written 14.2 years ago by ▴ 330
0
votes
3
replies
1.2k
views
Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
14.3 years ago Patrick Aboyoun 1.6k
0
votes
0
replies
840
views
affycoretools vennSelect problem
Annotation GO Survival probe annotate genefilter affy graph limma gcrma annaffy RBGL
14.6 years ago Nick Henriquez ▴ 20
0
votes
2
replies
861
views
affycoretools vennSelect problem
GO Survival annotate genefilter affy graph gcrma annaffy RBGL GOstats biomaRt affyio
updated 14.6 years ago by 62k • written 14.6 years ago by ▴ 30
0
votes
2
replies
1.0k
views
'Factorial Design' package question
Survival cdf multtest affy factDesign biomaRt Survival cdf multtest affy factDesign
14.7 years ago Glazko, Galina ▴ 350
0
votes
0
replies
1.7k
views
Significance Analysis of Microarrays (SAM)
Survival Survival
14.7 years ago Eleni Christodoulou ▴ 150
0
votes
0
replies
938
views
SECOND ANNOUNCEMENT: IV International Course on Microarray Data Analysis
Microarray Annotation Normalization GO Visualization Classification Clustering Survival GO
15.0 years ago Ana Conesa ▴ 340
0
votes
0
replies
820
views
Inf values using SAM (package=siggenes)
Annotation Survival Cancer genefilter affy limma maDB affyio Annotation Survival Cancer
15.1 years ago Holger Schwender ▴ 900
0
votes
0
replies
864
views
Inf values using SAM (package=siggenes)
Survival Cancer affy limma maDB affyio Survival Cancer affy limma maDB affyio
15.1 years ago Julian Lee ▴ 140
0
votes
0
replies
801
views
MTP error
GO Survival multtest affy affydata annaffy affyPLM affyio GO Survival multtest affy
15.2 years ago Boel Brynedal ▴ 200
0
votes
0
replies
1.1k
views
FIRST ANNOUNCEMENT: IV International Course on Microarray Data Analysis
Microarray Annotation Normalization GO Visualization Classification Clustering Survival GO
15.2 years ago Ana Conesa ▴ 340
0
votes
1
reply
740
views
combining data from two R arrays
GO Survival annotate genefilter vsn tilingArray GO Survival annotate genefilter vsn
15.3 years ago Richard Harrison ▴ 70
0
votes
4
replies
1.0k
views
running time of snapCGH processCGH and runDNAcopy
aCGH Survival CGH annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH aCGH
updated 15.3 years ago by ▴ 230 • written 15.3 years ago by ▴ 110
0
votes
2
replies
861
views
Chromosome 23 and 24 dropped after run snapCGH processCGH
aCGH Survival Cancer annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH
updated 15.3 years ago by ▴ 40 • written 15.3 years ago by ▴ 110
0
votes
2
replies
862
views
vsm2
Survival geneplotter affy vsn limma affyio Survival geneplotter affy vsn limma affyio
updated 15.3 years ago by 13k • written 15.3 years ago by ▴ 70
0
votes
0
replies
848
views
code for technical replicates in Limma with affy
Survival cdf annotate affy limma gcrma matchprobes affyio Survival cdf annotate affy
15.4 years ago Richard Friedman ★ 2.0k
0
votes
2
replies
908
views
problem with probes2tableBM
Annotation GO Survival hgu133a2 annotate genefilter affy graph gcrma matchprobes GOstats
updated 15.4 years ago by ▴ 500 • written 15.4 years ago by ▴ 510
0
votes
0
replies
737
views
problem with function to interrogate x:Map (exonmap)
Survival genefilter affy plier affyio exonmap Survival genefilter affy plier affyio
15.4 years ago Wolfgang Raffelsberger ▴ 160
0
votes
7
replies
1.3k
views
problem with GOstats, developmental version?
GO Survival hgu95av2 annotate affy affydata graph Rgraphviz limma gcrma matchprobes GO
updated 15.4 years ago by ★ 7.4k • written 15.4 years ago by ★ 2.2k
0
votes
4
replies
992
views
problems rma() with mouse exon affy data in exonmap package
Survival cdf genefilter affy simpleaffy plier exonmap Survival cdf genefilter affy
updated 15.4 years ago by 62k • written 15.4 years ago by ▴ 20
0
votes
1
reply
852
views
Exonmap mapping problems
Survival genefilter affy plier affyio exonmap Survival genefilter affy plier affyio
updated 15.4 years ago by ▴ 120 • written 15.4 years ago by ▴ 10
0
votes
6
replies
2.7k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation GO Survival ExperimentData cdf DynDoc genefilter geneplotter multtest affy GO
updated 15.4 years ago by ▴ 220 • written 15.4 years ago by ★ 2.2k
0
votes
0
replies
1.4k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation GO Survival ExperimentData cdf DynDoc genefilter geneplotter multtest affy GO
15.4 years ago Min Wook Kim ▴ 20
50 results • Page 1 of 1
Recent ...
Replies
Comment: transcript name mapping between human and mouse by Eric • 0
It works very well, and thanks for such a great answer! Because I use the old version gtf from GENECODE (vM12), the id version does not mat…
Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Bernardo • 0
Just did that, thank you for the suggestion.
Comment: Empty ChipQC Report by Okan • 0
Hi, I have the same issue. Have you found any solution or any reason why this is happening?
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k
Am I understanding correctly that you have 24 RNA-seq libraries in total, 6 from the pooled samples and 18 from regular samples with biolog…
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by k.roelfs • 0
I'm sorry, I know it is kinda confusing... We have 6 pools in total: Phenotype A: T1a, T2, T1b, T1c Phenotype B: T1, T2 Each pool consist…
Votes
Answer: transcript name mapping between human and mouse
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
Volcano Plot in R
Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.
Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.
Awards • All
Teacher to Michael Love 39k
Teacher to James W. MacDonald 62k
Popular Question to Assa Yeroslaviz ★ 1.5k
Scholar to ATpoint ★ 2.0k
Popular Question to adR ▴ 20
Locations • All
WEHI, Melbourne, Australia, 17 minutes ago
United States, 18 minutes ago
India, 29 minutes ago
Australia, 54 minutes ago
Hong Kong, 1 hour ago
Traffic: 270 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6