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limma with interaction term
R biostatistics limma Epigenetics
3 months ago • updated 11 weeks ago Jitendra ▴ 10
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limma design model for categorical variable
DNAMethylation limmaGUI biostatistics limma
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Job: Research Associate, statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
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23 months ago helene.ruffieux • 0
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Job: Research Associate, computational/statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
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2.2 years ago helene.ruffieux • 0
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Job: Job opening - Data Scientist II - Fred Hutchinson Cancer Research Center
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2.2 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Post-Doctoral Research Fellow, Biostatistics - Seattle, WA
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4.0 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Data Sciences Statistician - Dana-Farber Cancer Institute
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4.2 years ago Patrick Kimes ▴ 10
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Job: Metabolomics Bioinformatics Postdoc Position at Steno Diabetes Center Copenhagen
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Job: Post-Doctoral Research Fellow, Biostatistics, Bioinformatics and Computational Biology - Fred Hutchinson Cancer Research Center - Seattle, WA
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4.6 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
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4.8 years ago Michael Prummer • 0
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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
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5.1 years ago Patrick Kimes ▴ 10
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Job: Postdoctoral positions in drug discovery and genome data science
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Job: Biostatistics Analyst II - high throughput single-cell assays
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5.3 years ago careers • 0
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Job: Biostatistics Scientist II - high throughput single-cell assays
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Job: Data scientist postdoctoral position at Johns Hopkins
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5.4 years ago hjaarop1 • 0
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Job: Postdoctoral Position: Bioinformatics/data science
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Job: PhD and PostDoc position in computational cancer biology in Milan
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5.5 years ago marschaefer • 0
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Job: Statistical Research Associate
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6.0 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
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6.1 years ago xzhousph • 0
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Job: APPLIED RESEARCH SCIENTIST II, Cancer Epidemiology dept., Moffitt Cancer Center, Tampa, FL
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6.2 years ago claudia.lopez-matamoros • 0
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Job: Bioinformatician/Biostatistician - Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Mainz, Germany
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6.4 years ago Federico Marini ▴ 150
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DESeq2 and betaPrior
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6.7 years ago Elena Grassi ▴ 10
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
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7.0 years ago hong.lee • 0
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News: May Institute Computation and statistics for mass spectrometry and proteomics
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7.3 years ago Laurent Gatto 1.6k
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Job: (Bio-)Statistician at dkfz, Heidelberg, Germany
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7.5 years ago m.hummel ▴ 10
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Job: PhD student, Bioinformatician and Bioinformatic Data Manager positions in the areas of Bioinformatics and Biostatistics at the University Medical Cen…
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7.9 years ago • updated 7.8 years ago Frank Kramer ▴ 60
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Job: PhD Positions in Computational Cancer Research
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8.0 years ago Bernd Fischer ▴ 550
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Calculating a score from fold change matrix of pair-wise rna-seq data
rna-seq deseq2 differential gene expression biostatistics
8.1 years ago g.atla ▴ 10
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Job: Data scientist/bioinformatician - Paris
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8.6 years ago David Enot ▴ 30
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Job: PhD student and post-doctoral position (computational, molecular medicine)
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8.9 years ago Simon Anders ★ 3.7k
30 results • Page 1 of 1
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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