Bioconductor Biseq

Showing : Biseq • reset

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1.9k

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BiSeq readBismark

updated 8.5 years ago by James W. MacDonald 65k • written 8.5 years ago by Neel Aluru ▴ 460

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3.0k

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biseq fdr data results

9.1 years ago • updated 9.0 years ago mnaymik ▴ 10

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938

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biseq beta regression

3.9 years ago akhaira • 0

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1.2k

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BiSeq DMR

updated 3.9 years ago by James W. MacDonald 65k • written 3.9 years ago by akhaira • 0

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2.5k

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dmr methylation deseq2 bsseq biseq

updated 8.6 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.6 years ago by enricoferrero ▴ 660

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1.7k

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methylation linear model dmr bsseq biseq

8.4 years ago enricoferrero ▴ 660

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580

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BiSeq Coldata

3.9 years ago akhaira • 0

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936

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biseq package installation r

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by lwh863 • 0

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737

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BiSeq Wald test Beta regression

5.3 years ago mira • 0

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612

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biseq betaRegression RRBS Methylation

4.1 years ago i.s.castanho • 0

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646

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biseq R methylation

4.0 years ago AishaD • 0

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474

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Biseq

3.9 years ago akhaira • 0

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732

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BiSeq testClusters error dmr

3.9 years ago • updated 3.8 years ago akhaira • 0

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926

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bedgraph .cov wig biseq coverage

3.8 years ago akhaira • 0

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752

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Biseq Methylation DMP DMR RRBS

3.8 years ago i.s.castanho • 0

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1.7k

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BiSeq BiSeq

updated 10.3 years ago by David Iles ▴ 130 • written 10.3 years ago by Hans-Ulrich Klein ▴ 330

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638

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BiSeq

2.3 years ago • updated 2.2 years ago thomas.koefoed • 0

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2.0k

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biseq RRBS SAAP-BS coverage

9.0 years ago maria.maqueda • 0

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1.9k

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biseq error trimClusters

updated 8.3 years ago by Katja Hebestreit ▴ 130 • written 8.3 years ago by kms68 • 0

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1.3k

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biseq methylation dmr analysis

updated 7.4 years ago by Katja Hebestreit ▴ 130 • written 7.4 years ago by jjalmagro • 0

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1.1k

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biseq RRBS betaregression

7.1 years ago l.eijssen • 0

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1.1k

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dna methylation biseq

updated 6.4 years ago by Gordon Smyth 50k • written 6.4 years ago by ahmad.moousavi • 0

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908

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biseq ccle

5.8 years ago spr ▴ 10

23 results • Page 1 of 1

Recent ...

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Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.