Showing : Cancer • reset
0
votes
1
reply
687
views
Fwd: Creating One Single Object with Phenotype and Expression Data
GO Cancer GO Cancer
updated 14.0 years ago by ★ 13k • written 14.0 years ago by ▴ 30
0
votes
1
reply
1.9k
views
[Bioc-sig-seq] as.data.frame on GRanges object with DNAStringSet in values
Cancer Biostrings GLAD Cancer Biostrings GLAD
updated 14.0 years ago by ★ 11k • written 14.0 years ago by 16k
0
votes
0
replies
878
views
Creating One Single Object with Phenotype and Expression Data
Cancer Cancer
14.0 years ago Ben Ganzfried ▴ 30
0
votes
0
replies
1.7k
views
illuminaHumanv4 mappings
Infrastructure Cancer Homo sapiens probe AnnotationDbi ASSIGN Infrastructure Cancer probe
14.0 years ago Mark Cowley ▴ 910
0
votes
0
replies
1.0k
views
course announcement: Bioconductor basics, 24-25 oct 2011, Longwood Medical Area, Boston
Genetics Cancer Genetics Cancer
14.0 years ago Vincent J. Carey, Jr. 6.7k
0
votes
1
reply
1.2k
views
Easy way to map Exon array probes to coordinates?
Cancer exonmap xps Cancer exonmap xps
updated 14.0 years ago by ★ 3.9k • written 14.0 years ago by ▴ 260
0
votes
0
replies
1.3k
views
Annotation for Mouse Affy SNP arrays (MOUSEDIVm520650)?
Annotation Cancer VanillaICE crlmm Annotation Cancer VanillaICE crlmm
14.0 years ago Daniel Rico ▴ 110
0
votes
0
replies
1.9k
views
Postdoctoral positions at EMBL
Sequencing Genetics GO Network Cancer genomes Sequencing Genetics GO Network Cancer
14.0 years ago Wolfgang Huber ★ 13k
0
votes
1
reply
1.5k
views
illuminaHumanv4 mappings
Cancer Homo sapiens Cancer Homo sapiens
updated 14.0 years ago by ★ 1.1k • written 14.1 years ago by ▴ 910
0
votes
3
replies
1.4k
views
[Bioc-sig-seq] first remove low quality or adaptor
Cancer Biostrings convert Cancer Biostrings convert
updated 14.1 years ago by ★ 2.0k • written 14.1 years ago by 16k
0
votes
0
replies
927
views
lumi combine with controlData
Cancer Cancer
14.1 years ago Mark Cowley ▴ 910
0
votes
6
replies
2.7k
views
[Bioc-devel] XML package downloading problem with bioconductor.org
Cancer BiocInstaller Cancer BiocInstaller
updated 14.1 years ago by ▴ 50 • written 14.1 years ago by 6.7k
0
votes
0
replies
1.2k
views
XML package downloading problem with bioconductor.org
Cancer BiocInstaller Cancer BiocInstaller
14.1 years ago Liu,Bin ▴ 50
0
votes
0
replies
1.5k
views
doubt in HTqPCR
Cancer ddCt cycle HTqPCR ASSIGN Cancer ddCt cycle HTqPCR ASSIGN
14.1 years ago Heidi Dvinge ★ 2.0k
0
votes
1
reply
970
views
[Bioc-devel] DNS problem with bioconductor.org
Cancer PING Cancer PING
updated 14.1 years ago by ★ 8.2k • written 14.1 years ago by ▴ 160
0
votes
2
replies
1.3k
views
DNS problem with bioconductor.org
Cancer PING Cancer PING
updated 14.1 years ago by ▴ 20 • written 14.1 years ago by ▴ 160
0
votes
0
replies
2.8k
views
Postdoctoral Fellow - Bioinformatics - Singapore, IMCB, Biopolis
Genetics Metabolomics Pathways Cancer Genetics Metabolomics Pathways Cancer
14.1 years ago Emilie Bard ▴ 10
0
votes
1
reply
1.2k
views
Course: Introduction to R / Bioconductor for Sequence Analysis, October 17-18
Cancer Cancer
14.1 years ago Martin Morgan 25k
0
votes
0
replies
1.0k
views
European Developers's Workshop 2011
Proteomics Cancer Proteomics Cancer
14.1 years ago Crispin Miller ★ 1.1k
0
votes
0
replies
1.2k
views
Bioconductor European Developers' Workshop, Manchester 2011
Proteomics Cancer Proteomics Cancer
14.1 years ago Crispin Miller ★ 1.1k
0
votes
0
replies
2.1k
views
4 PhD positions in cancer computational biology
Sequencing Epigenetics Cancer Sequencing Epigenetics Cancer
14.1 years ago mattia pelizzola ▴ 200
0
votes
0
replies
1.8k
views
[job] Postdoc position on the bioinfomatics of epigenetic circuits in genome programming and reprogramming at the European Institute of Oncology in M…
RNASeq ChIPSeq Epigenetics Cancer chipseq SANTA RNASeq ChIPSeq Epigenetics Cancer SANTA
14.1 years ago stefano iacus ▴ 430
0
votes
0
replies
3.3k
views
unique, duplicated, order, etc... on a GRanges object
Cancer GenomicRanges Cancer GenomicRanges
14.2 years ago Hervé Pagès 16k
0
votes
2
replies
2.0k
views
import.bw to Rle?
GO Cancer convert GO Cancer convert
updated 14.2 years ago by ★ 11k • written 14.2 years ago by ▴ 740
0
votes
0
replies
996
views
align microRNA with custom mRNA sequences
Alignment Cancer Biostrings microRNA Alignment Cancer Biostrings microRNA
14.2 years ago Hervé Pagès 16k
0
votes
1
reply
1.6k
views
creating a UniprotIdentifier within GSEABase
Annotation Cancer hgu95av2 convert GSEABase Annotation Cancer hgu95av2 convert GSEABase
updated 14.2 years ago by 25k • written 14.2 years ago by ▴ 910
0
votes
2
replies
1.3k
views
Fwd: Probe matching using vmatchPDict
Cancer probe Cancer probe
updated 14.2 years ago by ▴ 50 • written 14.2 years ago by 16k
0
votes
0
replies
1.5k
views
Some problems in combining ExpressionSet objects with the combine() function
Microarray GO Cancer Colon affy limma Microarray GO Cancer Colon affy limma
14.2 years ago James W. MacDonald 68k
0
votes
1
reply
2.0k
views
Some problems in combining ExpressionSet objects with the combine() function
Microarray Cancer Colon limma Microarray Cancer Colon limma
updated 14.2 years ago by 68k • written 14.2 years ago by ▴ 70
0
votes
1
reply
1.1k
views
[R] Fwd: Rgraphviz installation problem
GO Cancer Rgraphviz GO Cancer Rgraphviz
updated 14.2 years ago by ▴ 30 • written 14.2 years ago by 25k
0
votes
0
replies
1.2k
views
Fwd: [R] Rgraphviz installation problem
Cancer Rgraphviz Cancer Rgraphviz
14.2 years ago Ram H. Sharma ▴ 30
0
votes
2
replies
1.2k
views
lumi/Biobase combine and gplots interaction
Cancer Cancer
updated 14.3 years ago by 25k • written 14.3 years ago by ▴ 740
0
votes
1
reply
1.7k
views
Can't reproduce assessment data included in affycomp package
Cancer affy affycomp PROcess safe Cancer affy affycomp PROcess safe
updated 14.3 years ago by ▴ 590 • written 14.3 years ago by ★ 2.3k
0
votes
4
replies
1.6k
views
IRanges: Request for a "step" argument in runsum
Coverage Annotation Cancer PROcess IRanges genomes Coverage Annotation Cancer PROcess
updated 14.3 years ago by 16k • written 14.3 years ago by ▴ 100
0
votes
0
replies
1.4k
views
Pathway specific gene lists in SPIA
Bayesian Cancer Bayesian Cancer
14.3 years ago Richard Friedman ★ 2.0k
0
votes
2
replies
1.8k
views
RV: wgcna
Network Cancer Network Cancer
updated 14.3 years ago by ★ 3.4k • written 14.3 years ago by ▴ 50
0
votes
0
replies
899
views
Microarrays intersection to expand your discovery
Microarray Cancer Microarray Cancer
14.3 years ago Tata Mumu ▴ 10
0
votes
1
reply
1.9k
views
which illumina annotation package I should use for Illumina Mouse Ref 8 v 1.1 expression beadchip
Cancer Cancer
updated 14.3 years ago by ★ 1.1k • written 14.3 years ago by ▴ 580
0
votes
1
reply
956
views
IRanges: Request for a "step" argument in runsum
Cancer PROcess IRanges genomes Cancer PROcess IRanges genomes
updated 14.3 years ago by ★ 11k • written 14.3 years ago by 16k
0
votes
2
replies
1.3k
views
IRanges package: findOverlaps on blobs
Cancer convert IRanges Cancer convert IRanges
14.4 years ago • updated 14.3 years ago Hervé Pagès 16k
0
votes
2
replies
2.7k
views
Sliding window t-test?
Cancer Cancer
updated 14.4 years ago by ▴ 190 • written 14.4 years ago by ★ 1.1k
0
votes
0
replies
896
views
BSgenome package - danRer7 genome assembly
Cancer BSgenome BSgenome Cancer BSgenome BSgenome
14.4 years ago Hervé Pagès 16k
0
votes
3
replies
1.3k
views
lumi and plotHousekeepingGene
Cancer lumi Cancer lumi
updated 14.4 years ago by ▴ 440 • written 14.4 years ago by ▴ 740
0
votes
0
replies
1.3k
views
Chip version of Illumina HT 12 data [ lumi getChipInfo() method ]
Microarray Normalization Cancer Breast lumi Microarray Normalization Cancer Breast lumi
14.4 years ago Md.Mamunur Rashid ▴ 260
0
votes
5
replies
2.6k
views
DESeq and paired samples - pairing vs pooling
Cancer DESeq Cancer DESeq
updated 14.4 years ago by 53k • written 14.4 years ago by ▴ 20
4
votes
0
replies
3.3k
views
Evidence-based guidelines for use the method="robust" option in lmFit
Microarray Normalization Bayesian Regression Cancer limma Microarray Normalization Cancer
updated 5 months ago by • 0 • written 14.4 years ago by ★ 2.0k
0
votes
0
replies
1.2k
views
lumi : Problems with the gammaFitEM() and lumiMethyStatus() functions.in lumi
Microarray Cancer lumi Microarray Cancer lumi
14.4 years ago NAIARA GARCÍA ▴ 10
0
votes
0
replies
923
views
Update to FlowMerge
Cancer flowMerge Cancer flowMerge
14.4 years ago Greg Finak ▴ 240
0
votes
1
reply
1.1k
views
Update to flowMerge
Cancer flowMerge Cancer flowMerge
updated 14.4 years ago by ▴ 150 • written 14.4 years ago by ▴ 240
0
votes
12
replies
3.0k
views
Biomart server down?
Genetics Cancer biomaRt Genetics Cancer biomaRt
updated 14.4 years ago by ▴ 660 • written 14.4 years ago by ▴ 20
1,555 results • Page 11 of 32
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Awards • All
Popular Question to Michael Love 43k
Popular Question to Peter • 0
Popular Question to Travis • 0
Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 53k
Locations • All
Denmark, 7 minutes ago
Pittsburgh, United States, 26 minutes ago
United States, 30 minutes ago
WEHI, Melbourne, Australia, 3 hours ago
United States, 3 hours ago
Traffic: 970 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6