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Conda
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reset
1
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3.6k
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Cannot use Bioconductor with new conda R installation?
bioconductor
biocinstaller
installation
conda
7.0 years ago
jol.espinoz
▴ 40
1
vote
1
reply
1.4k
views
diffbind installation through Conda fails
DiffBind
conda
updated 3.9 years ago by
Rory Stark
★ 5.2k • written 3.9 years ago by
Benjamin Ostendorf
▴ 90
1
vote
1
reply
4.5k
views
Setting up bioconductor on a Linux server using conda
dada2
conda
phyloseq
updated 3.9 years ago by
James W. MacDonald
68k • written 3.9 years ago by
Daniel
• 0
0
votes
1
reply
1.4k
views
conda install of diffHic
diffHic
conda
updated 5.5 years ago by
Aaron Lun
★ 28k • written 5.5 years ago by
smithgr
• 0
0
votes
1
reply
1.4k
views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda
affyio
error
6.3 years ago
benjamin.saintpierre
• 0
0
votes
3
replies
1.6k
views
Reason: image not found Error: package GenomeInfoDb could not be loaded
deseq2
conda
6.3 years ago
adam.cribbs
▴ 10
0
votes
5
replies
4.2k
views
source(biocLite.R) leads to this error >>> Peer certificate cannot be authenticated with given CA certificates
biocinstaller
installation
install
source
conda
updated 8.5 years ago by
Martin Morgan
25k • written 8.5 years ago by
jol.espinoz
▴ 40
7 results • Page
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Replies
Comment: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis
by
Blair
• 0
@[Sprunki][1] wrote: Please read the vignette and think about adhering to the author's best practice, which discusses batch impacts. [1…
Comment: error in ChAMP loading file
by
81becky
• 0
hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…
Answer: DESeq2 adujsted p-value cutoff seemingly not working
by
James W. MacDonald
68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
SofieK
• 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
deltaexploitss
• 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Votes
Answer: Efficiently working with HDF5-backed SingleCellExperiments
Efficiently working with HDF5-backed SingleCellExperiments
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
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