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News:
Bioconductor 3.22 Release Schedule
Devel
Release
Bioconductor
written 11 weeks ago by
shepherl
4.2k
0
votes
2
replies
331
views
can't post
devel
updated 4 months ago by
shepherl
4.2k • written 4 months ago by
machne
• 0
2
votes
0
replies
858
views
News:
Bioconductor 3.21 is Released!
devel
release
Release
Devel
7 months ago
shepherl
4.2k
0
votes
1
reply
848
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
13 months ago • updated 8 months ago
shepherl
4.2k
0
votes
0
replies
418
views
News:
List of Deprecated Packages for Bioc3.21
devel
Release
release
Devel
8 months ago
shepherl
4.2k
0
votes
11
replies
2.6k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
21 months ago • updated 13 months ago
shepherl
4.2k
0
votes
1
reply
1.6k
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
written 3.0 years ago by
Robert Castelo
★ 3.4k
3
votes
18
replies
4.8k
views
News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
2.4 years ago • updated 19 months ago
shepherl
4.2k
0
votes
4
replies
2.1k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 2.1 years ago by
Guido Hooiveld
★ 4.1k • written 2.1 years ago by
shepherl
4.2k
0
votes
3
replies
1.2k
views
Suggested package missing from Development version of Bioconductor
Devel
updated 2.2 years ago by
shepherl
4.2k • written 2.2 years ago by
Richard
• 0
0
votes
2
replies
1.6k
views
News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
2.7 years ago • updated 2.5 years ago
shepherl
4.2k
0
votes
2
replies
998
views
No compilation on Windows y compilation on linux
Devel
PackageType
deve
2.6 years ago • updated 2.5 years ago
Franck RICHARD
• 0
3
votes
6
replies
1.8k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 2.7 years ago by
darrelvanhoy
• 0 • written 2.8 years ago by
shepherl
4.2k
1
vote
2
replies
1.9k
views
GO.db for Bioconductor 3.17
GO.db
devel
2.8 years ago
Amanda D. Clark
• 0
0
votes
0
replies
941
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
3.1 years ago
shepherl
4.2k
0
votes
2
replies
1.3k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
3.1 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
3.2 years ago
shepherl
4.2k
4
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
3.2 years ago
shepherl
4.2k
0
votes
3
replies
1.4k
views
Package Review/Release Timeline
Devel
updated 3.5 years ago by
Gordon Smyth
53k • written 3.5 years ago by
Jonathan
• 0
0
votes
4
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
3.7 years ago • updated 3.1 years ago
shepherl
4.2k
0
votes
0
replies
1.0k
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
3.7 years ago
shepherl
4.2k
1
vote
0
replies
1.3k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
3.7 years ago
shepherl
4.2k
4
votes
2
replies
1.7k
views
GenomicRanges::union fails on R devel
devel
GenomicRanges
4.2 years ago
Guillaume Devailly
▴ 60
0
votes
2
replies
2.2k
views
unable to load shared object Rsamtools.dll':
Devel
updated 4.2 years ago by
Mike Smith
★ 6.6k • written 4.2 years ago by
Franck
• 0
1
vote
0
replies
1.4k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
4.2 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
knitr ERROR on Biocondcutor builders
Devel
Bioconductor
Packages
BuildReport
devel
4.4 years ago
shepherl
4.2k
2
votes
9
replies
2.4k
views
New annotation package - no response from packages@bioconductor.org
Devel
devel
updated 4.5 years ago by
kayla.interdonato
▴ 160 • written 4.5 years ago by
athief
▴ 20
0
votes
0
replies
1.1k
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
4.6 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
4.6 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
5.6 years ago
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release
devel
bioconductor
News
5.7 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
Important Deadlines for RELEASE
release
devel
deadline
News
updated 6.1 years ago by
Martin Morgan
25k • written 6.1 years ago by
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Deadline for commits to current Release 3.9 Branch and Devel 3.10
release
freeze
deadline
devel
News
6.2 years ago
shepherl
4.2k
0
votes
1
reply
1.4k
views
News:
Deadline for devel branch 3.9 to pass R CMD build and R CMD check
release
devel
deadline
freeze
News
6.7 years ago
shepherl
4.2k
0
votes
1
reply
1.7k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
6.8 years ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
6.9 years ago
shepherl
4.2k
1
vote
0
replies
1.4k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
7.2 years ago
shepherl
4.2k
0
votes
0
replies
1.8k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
8.1 years ago
shepherl
4.2k
0
votes
1
reply
2.4k
views
Is there a way to change the name of R package that is already published on bioconductor?
r
developers
devel
updated 10.1 years ago by
Martin Morgan
25k • written 10.1 years ago by
MarcinKosiński
• 0
3
votes
1
reply
1.6k
views
Reverse the effect of useDevel()
bioconductor
devel
developers
updated 10.5 years ago by
Martin Morgan
25k • written 10.5 years ago by
andrew.j.skelton73
▴ 370
40 results • Page
1 of 1
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Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Answer: Question about DESeq2 Design for Paired Treatment Study
by
ATpoint
★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR
by
efoss
▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma
by
Gordon Smyth
53k
Answered here: https://support.bioconductor.org/p/16318/
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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