10 months ago • updated 16 days ago
shepherl
3.9k
3
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18
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2.9k
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0
votes
7
replies
692
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9 weeks ago • updated 10 days ago
shepherl
3.9k
0
votes
2
replies
875
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12 months ago • updated 11 months ago
shepherl
3.9k
0
votes
1
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963
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0
votes
3
replies
817
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updated 23 months ago by
Gordon Smyth
50k
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written 23 months ago by
Jonathan
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0
0
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1
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2.1k
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updated 8.5 years ago by
Martin Morgan
25k
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written 8.5 years ago by
MarcinKosiński
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0
3
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6
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1.1k
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updated 13 months ago by
darrelvanhoy
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0
•
written 14 months ago by
shepherl
3.9k
3
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1
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1.2k
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updated 8.9 years ago by
Martin Morgan
25k
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written 8.9 years ago by
andrew.j.skelton73
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370
4
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2
replies
1.2k
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2.6 years ago
Guillaume Devailly
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60
2
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9
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1.6k
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updated 2.9 years ago by
kayla.interdonato
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160
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written 2.9 years ago by
athief
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20
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0
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805
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2.8 years ago
shepherl
3.9k
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0
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724
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0
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0
replies
804
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3.1 years ago • updated 3.0 years ago
shepherl
3.9k
0
votes
2
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1.5k
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updated 2.6 years ago by
Mike Smith
★
6.5k
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written 2.6 years ago by
Franck
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0
0
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0
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617
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2.1 years ago
shepherl
3.9k
1
vote
0
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829
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0
votes
4
replies
1.2k
views
2.1 years ago • updated 18 months ago
shepherl
3.9k
1
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2
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895
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14 months ago
Amanda D. Clark
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0
0
votes
0
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724
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19 months ago
shepherl
3.9k
0
votes
2
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527
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11 months ago
Franck RICHARD
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0
0
votes
0
replies
772
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17 months ago
Robert Castelo
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3.3k
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0
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851
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0
votes
0
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566
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0
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2
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753
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18 months ago
shepherl
3.9k
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4
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725
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0
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3
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529
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0
votes
0
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1.3k
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1
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1
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1.1k
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0
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1
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1.2k
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0
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0
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813
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0
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883
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0
votes
0
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739
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4.1 years ago
shepherl
3.9k
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0
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877
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Recent ...
Replies
Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first.
Also take a st…
Answer: Too many significant genes when integrating gtex and tcga
by
James W. MacDonald
65k
See `?results`, in particular the lfcThreshold argument.
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline.
The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
•
0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
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arfranco
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But.. How to run a temporal assay?
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