Showing : GenomicInteractions • reset
1
vote
0
replies
877
views
subsetByOverlaps in GenomicInteractions object doesn't work properly?
InteractionSet subsetByOverlaps GenomicInteractions
2.3 years ago Laureano Tomás-Daza ▴ 10
0
votes
0
replies
902
views
Error in fragEnds[, 1] : incorrect number of dimensions while using printWigFile function in Basic4Cseq package
GenomicInteractions Basic4Cseq DNASeq GenomicFiles
4.3 years ago koushik • 0
1
vote
7
replies
2.2k
views
problem recasting InteractionSet into a DGEList
diffHic GenomicInteractions edgeR HiC cooler
updated 5.2 years ago by ★ 29k • written 5.2 years ago by ▴ 30
0
votes
5
replies
1.6k
views
GenomicInteractions duplicate annotations
duplicate GenomicInteractions
5.4 years ago dogancan • 0
0
votes
4
replies
1.2k
views
duplicated interactions using package GenomicInteractions
GenomicInteractions
5.6 years ago chang.jiaming • 0
0
votes
4
replies
1.7k
views
col.interactions.types for gviz InteractionTrack from the GenomicInteractions
GenomicInteractions gviz
updated 5.7 years ago by ▴ 140 • written 5.7 years ago by ▴ 30
2
votes
3
replies
1.1k
views
Export annotation from GenomicInteractions package
genomicInteractions annotation
updated 6.4 years ago by ▴ 140 • written 6.4 years ago by • 0
0
votes
3
replies
1.9k
views
Gviz (GenomicInteractions) arc height and boundaries
GenomicInteractions Gviz
updated 6.5 years ago by ▴ 140 • written 6.5 years ago by ▴ 10
0
votes
2
replies
1.7k
views
Visualizing 4c-seq as arc
genomicinteractions gviz interactionset
updated 6.9 years ago by ▴ 140 • written 6.9 years ago by • 0
2
votes
5
replies
1.9k
views
plotCisTrans function in GenomicInteractions package
genomicinteractions
8.1 years ago sarvesh.nikumbh ▴ 10
5
votes
4
replies
3.4k
views
Plotting genomic interactions in Gviz
gviz genomicinteractions
9.5 years ago enricoferrero ▴ 680
0
votes
2
replies
1.5k
views
GenomicInteractions read in bedpe error
genomicinteractions GRanges
updated 9.7 years ago by ▴ 140 • written 9.7 years ago by ▴ 200
3
votes
5
replies
2.6k
views
GenomicInteractions package read in meta data file
GenomicInteractions
updated 9.8 years ago by ▴ 40 • written 9.8 years ago by ▴ 200
13 results • Page 1 of 1
Recent ...
Replies
Answer: Important: Bioconductor Release 3.22 Delayed by shepherl 4.2k
We will continue with the release on Thursday October 30th. We have shifted one day as originally planned. Thank you
Comment: bake() and cool() resulting in an empty table by Francesc • 0
Hi Catherine, thanks so much for using dar and for reporting this bug! We have identified the issue and pushed a fix to the dar repo (PR #…
Comment: Using DESeq2 for age prediction by ATpoint ★ 5.0k
You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…
Comment: Using DESeq2 for age prediction by picasa1983 • 0
Thanks ! Do you have any idea how to do that ?
Answer: Using DESeq2 for age prediction by ATpoint ★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
Awards • All
Popular Question to Gordon Smyth 53k
Oracle to shepherl 4.2k
Popular Question to Matej • 0
Popular Question to Hervé Pagès 16k
Popular Question to Josef Frank • 0
Locations • All
The city by the bay, 1 minute ago
United States, 47 minutes ago
United States, 3 hours ago
United States, 3 hours ago
United States, 4 hours ago
Traffic: 794 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6