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tximport ERROR : all(file.exists(files)) is not TRUE
Linux
R
tximport
3.6 years ago • updated 3.5 years ago
nakane_clan
• 0
0
votes
4
replies
5.9k
views
Problems Installing biomaRt
biomart
linux
updated 4.8 years ago by
Martin Morgan
25k • written 7.4 years ago by
christopher.mcfall
• 0
1
vote
6
replies
1.8k
views
How to install DEXSeq on R 3.4.4
DEXSEq
Linux
updated 6.4 years ago by
Alejandro Reyes
★ 1.9k • written 6.4 years ago by
justinkablan225
▴ 10
0
votes
1
reply
1.4k
views
ChemmineOB Installation RHEL
ChemmineOB
Linux
Installation
6.5 years ago
jandrosavich
• 0
0
votes
2
replies
6.7k
views
[Resolved] RcppArmadillo pckg ERRORS : non-zero exit status (and so DESeq2 also)
DESEq2
R
linux
RcppArmadillo
6.6 years ago
RS1
• 0
0
votes
0
replies
1.3k
views
Job:
Bioinformatician ('CHBIO15) (m/f)
bioinformatician job
Linux
NGS
Job
6.8 years ago
l.brown
▴ 10
0
votes
0
replies
1.6k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
7.5 years ago
EMBL Recruitment
• 0
1
vote
0
replies
1.8k
views
Problems running oligo functions in parallel on a linux computer
biocparallel
oligo
rma
linux
parallel
7.7 years ago
s.munster
▴ 40
0
votes
1
reply
1.7k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 7.8 years ago by
Mike Smith
★ 6.6k • written 8.0 years ago by
maxime.fortin
• 0
1
vote
4
replies
2.5k
views
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
linux
rsubread
installation
updated 8.2 years ago by
Mike Smith
★ 6.6k • written 8.2 years ago by
hjmangalam
• 0
0
votes
6
replies
2.8k
views
Chipseeker is unavabile on Linux CentOS7 ?
Bioconduct or
Chipseeker
CentOS7
Linux
installation
updated 8.9 years ago by
Guangchuang Yu
★ 1.2k • written 8.9 years ago by
spsp9987
• 0
0
votes
4
replies
3.5k
views
Unable to install Rcpp package for genefo
Rcpp
genefo
linux
linux mint
Rstudio
updated 9.1 years ago by
mfox
• 0 • written 9.1 years ago by
anjali.krishna1008
• 0
0
votes
1
reply
1.6k
views
R slow, using all physical memory and 20GB Virt
linux
r
phylogenetic
computational biology
updated 10.2 years ago by
Hervé Pagès
16k • written 10.2 years ago by
guilherme
• 0
3
votes
1
reply
1.5k
views
best server maintenance practices
linux
R
server
updated 11.0 years ago by
James W. MacDonald
68k • written 11.0 years ago by
Matthew McCormack
▴ 180
14 results • Page
1 of 1
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Comment: Heatmap of the Count Matrix
by
ArnulfoByrd
• 0
Perhaps PCA loadings offer a more comprehensive perspective. Now, thinking back, I recall struggling with a similar data reduction dilemma …
Answer: readBam vs read_bam_insert_metrics
by
James W. MacDonald
68k
Depends on what you mean by input. If you mean to ask if you use `readBam` to generate something to use as an argument to `read_bam_insert_…
Answer: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
by
James W. MacDonald
68k
There is an example in the help page for `forgeBSgenomePkgFromTwobitFile`. Have you tried emulating that?
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
What you describe sounds a good approach to me. I would also use sample weights (`sample.weights=TRUE` when running `voomLmFit`) and robust…
Comment: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg?
by
Michael Love
43k
I moved your post from an "answer" to a "comment". I don't know about `offst()` function, what is the scale or direction, or whether you a…
Votes
Answer: Limpa Pipeline Order
A: How barcode-plot enrichment is calculated?
A: How barcode-plot enrichment is calculated?
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
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