Bioconductor SVAseq

Showing : SVAseq • reset

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626

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RUVSeq svaseq

21 months ago Tongjun • 0

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1.1k

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RNASeq sva svaseq

updated 2.3 years ago by James W. MacDonald 65k • written 2.3 years ago by Bex • 0

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784

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limma sva Leafcutter SVAseq

2.6 years ago georgia.katsoula ▴ 40

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765

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sva svaseq surrogate variable analysis

updated 4.0 years ago by James W. MacDonald 65k • written 4.0 years ago by Mozart ▴ 30

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922

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svaseq sva

5.1 years ago flippy23 • 0

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877

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MEDIPS svaseq sva

updated 5.3 years ago by Lukas Chavez ▴ 570 • written 5.3 years ago by tofukaj • 0

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1.5k

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deseq2 svaseq

5.3 years ago bioinfo • 0

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1.4k

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edger sva svaseq limma

updated 5.9 years ago by Ryan C. Thompson ★ 7.9k • written 5.9 years ago by cats_dogs ▴ 20

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3.1k

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DESeq2 sva svaseq batch effect correction

6.3 years ago L_K • 0

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1.1k

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svaseq batcheffectcorrection

6.5 years ago burcu.atasu • 0

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1.5k

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ruvseq svaseq edaseq

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by llo ▴ 10

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1.2k

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sva svaseq batch effect batch effects batch effect correction

6.7 years ago vedran.franke • 0

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1.7k

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deseq2 svaseq

updated 6.7 years ago by Michael Love 41k • written 6.7 years ago by gpalidwor ▴ 10

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1.7k

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sva svaseq

updated 6.9 years ago by Guido Hooiveld ★ 3.9k • written 6.9 years ago by wamiqsaifi • 0

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2.5k

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limma sva svaseq

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by Bogdan ▴ 670

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1.8k

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svaseq dexseq

updated 7.2 years ago by Alejandro Reyes ★ 1.9k • written 7.2 years ago by tofukaj • 0

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2.3k

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svaseq combat sva RANseq batcheffect removebatcheffect

updated 7.5 years ago by Jakub ▴ 50 • written 7.5 years ago by amoltej ▴ 10

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5.2k

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deseq2 svaseq

7.6 years ago Akula, Nirmala NIH/NIMH [C] ▴ 190

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1.7k

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deseq2 sva svaseq

updated 7.7 years ago by Michael Love 41k • written 7.7 years ago by szenitha ▴ 20

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2.4k

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sva svaseq batcheffectcorrection

updated 7.7 years ago by Jeff Leek ▴ 650 • written 7.7 years ago by szenitha ▴ 20

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3.7k

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deseq2 sva svaseq pca

7.9 years ago Peter Alto ▴ 10

21 results • Page 1 of 1

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Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

Votes

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

SPIA plotP giving error

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Popular Question to rohitsatyam102 ▴ 20