2.2 years ago
thomas.koefoed
•
0
0
votes
1
reply
635
views
0
votes
0
replies
750
views
0
votes
1
reply
921
views
0
votes
1
reply
728
views
3.8 years ago
akhaira
•
0
2
votes
8
replies
933
views
3.8 years ago
akhaira
•
0
0
votes
0
replies
473
views
2
votes
10
replies
1.2k
views
updated 3.9 years ago by
James W. MacDonald
65k
•
written 3.9 years ago by
akhaira
•
0
1
vote
0
replies
575
views
0
votes
1
reply
642
views
0
votes
1
reply
608
views
0
votes
0
replies
733
views
0
votes
1
reply
927
views
updated 5.3 years ago by
Martin Morgan
25k
•
written 5.3 years ago by
lwh863
•
0
0
votes
0
replies
905
views
0
votes
1
reply
1.1k
views
updated 6.3 years ago by
Gordon Smyth
50k
•
written 6.3 years ago by
ahmad.moousavi
•
0
0
votes
1
reply
1.1k
views
7.1 years ago
l.eijssen
•
0
0
votes
3
replies
1.3k
views
updated 7.3 years ago by
Katja Hebestreit
▴
130
•
written 7.3 years ago by
jjalmagro
•
0
0
votes
6
replies
1.9k
views
updated 8.2 years ago by
Katja Hebestreit
▴
130
•
written 8.3 years ago by
kms68
•
0
1
vote
0
replies
1.7k
views
8.4 years ago
enricoferrero
▴
660
4
votes
4
replies
1.9k
views
updated 8.5 years ago by
James W. MacDonald
65k
•
written 8.5 years ago by
Neel Aluru
▴
460
1
vote
2
replies
2.5k
views
updated 8.5 years ago by
Kasper Daniel Hansen
★
6.5k
•
written 8.5 years ago by
enricoferrero
▴
660
2
votes
15
replies
3.0k
views
0
votes
5
replies
2.0k
views
0
votes
3
replies
1.7k
views
updated 10.2 years ago by
David Iles
▴
130
•
written 10.2 years ago by
Hans-Ulrich Klein
▴
330
Recent ...
Replies
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★
4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
•
0
Thank for your response. It is Illumina 450 K. I use this code
```{r }
library(IlluminaHumanMethylation450kanno.ilmn12.hg19)
annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★
5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed):
```
limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
•
0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Awards
• All
Popular Question to
siajunren
•
0
Scholar to
Rory Stark
★
5.2k
Popular Question to
tangming2005
▴
190
Popular Question to
Ian D.
▴
70
Popular Question to
junhui.li11
•
0
Locations
• All
United Kingdom, 2 minutes ago
Germany, 8 minutes ago
Singapore, 15 minutes ago
Belgium, 19 minutes ago
India, 37 minutes ago
United Kingdom, 2 minutes ago
Germany, 8 minutes ago
Singapore, 15 minutes ago
Belgium, 19 minutes ago
India, 37 minutes ago
Traffic: 682 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6