Bioconductor Boxplot

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3.0k

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t.test boxplot limma anova

11 months ago Chris ▴ 20

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809

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boxplot ggplot2

updated 2.1 years ago by ATpoint ★ 4.8k • written 2.1 years ago by Sooni ▴ 10

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1.1k

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knitr boxplot

updated 5.2 years ago by James W. MacDonald 68k • written 5.2 years ago by poojitha.stemcell ▴ 10

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boxplot bioconductor R error

5.3 years ago l154359 • 0

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1.9k

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boxplot reads fastq sequencing rsubread

updated 5.8 years ago by Wei Shi ★ 3.6k • written 5.8 years ago by Raito92 ▴ 60

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911

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affy boxplot

6.0 years ago pratikshasharma47 • 0

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876

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boxplot affymetrix data diferential expression

6.0 years ago pratikshasharma47 • 0

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883

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boxplot software error

updated 6.0 years ago by Gordon Smyth 52k • written 6.0 years ago by Raito92 ▴ 60

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5.7k

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VST deseq2 boxplot rnaseq

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by Konstantinos Yeles ▴ 80

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1.2k

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boxplot

updated 8.0 years ago by Peter Langfelder ★ 3.0k • written 8.0 years ago by farahqureshi5 • 0

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5.0k

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affy package boxplot hgu133plus2 oligo package

updated 8.1 years ago by James W. MacDonald 68k • written 8.1 years ago by Javier Pérez Florido ▴ 840

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edgeR boxplot

8.1 years ago snowru • 0

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2.5k

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gviz boxplot

updated 8.9 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.9 years ago by enricoferrero ▴ 680

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boxplot microarray pd.hugene.2.0.st

10.0 years ago • updated 9.9 years ago kanacska ▴ 10

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1.3k

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Rle boxplot

10.2 years ago Johannes Rainer ★ 2.1k

15 results • Page 1 of 1

Recent ...

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Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Benjamin ▴ 20

I have received a response from Ensembl regarding the items I have listed above. I wanted to post it here and will continue to post update…

Answer: Error in cnetplot by Guido Hooiveld ★ 4.1k

Unfortunately you did not show how you generated your input data (the object `enrichment`), nor did you show the output from `sessionInfo()…

Answer: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

I think this is because Ensembl can assign different Gene IDs to "the same gene" if it is found both on a standard chromosome and a scaffol…

Votes

Answer: Explannation for ROAST results

Comment: Limma comparing gene expression between base line and one treatment

Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?

clusterProfiler-GO enrichment Error

A: Machine learning in R book

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