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Showing :
boxplot
•
reset
2
votes
6
replies
4.8k
views
How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
22 months ago
Chris
▴ 20
0
votes
1
reply
1.0k
views
How to add pvalue to boxplot?
boxplot
ggplot2
updated 3.0 years ago by
ATpoint
★ 5.0k • written 3.0 years ago by
Sooni
▴ 10
0
votes
5
replies
1.4k
views
knitr error in sort.int - unable to knit a chunk with boxplot codes
knitr
boxplot
updated 6.1 years ago by
James W. MacDonald
68k • written 6.1 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.5k
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
6.1 years ago
l154359
• 0
2
votes
3
replies
2.3k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 6.7 years ago by
Wei Shi
★ 3.6k • written 6.7 years ago by
Raito92
▴ 60
0
votes
0
replies
1.1k
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
6.8 years ago
pratikshasharma47
• 0
1
vote
1
reply
1.1k
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
6.8 years ago
pratikshasharma47
• 0
2
votes
2
replies
1.1k
views
Boxplot object (from the RNASeqGeneEdgeRQL workflow) returning a blank file...
boxplot
software error
updated 6.8 years ago by
Gordon Smyth
53k • written 6.8 years ago by
Raito92
▴ 60
7
votes
11
replies
6.5k
views
Comparing means of VST tranformed RNA-Seq counts in different groups of samples with boxplots
VST
deseq2
boxplot
rnaseq
updated 7.7 years ago by
Michael Love
43k • written 7.7 years ago by
Konstantinos Yeles
▴ 90
0
votes
2
replies
1.4k
views
understanding the meaning boxplot
boxplot
updated 8.9 years ago by
Peter Langfelder
★ 3.0k • written 8.9 years ago by
farahqureshi5
• 0
0
votes
4
replies
5.4k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 8.9 years ago by
James W. MacDonald
68k • written 8.9 years ago by
Javier Pérez Florido
▴ 840
1
vote
4
replies
2.7k
views
EdgeR differentially expressed genes vs normal boxplot visualization
edgeR
boxplot
9.0 years ago
snowru
• 0
3
votes
10
replies
3.0k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 9.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.8 years ago by
enricoferrero
▴ 680
1
vote
8
replies
2.7k
views
boxplot, microarray, hugene 2.0 st
boxplot
microarray
pd.hugene.2.0.st
10.8 years ago
kanacska
▴ 10
0
votes
2
replies
1.5k
views
boxplot on an Rle object?
Rle
boxplot
11.0 years ago
Johannes Rainer
★ 2.1k
15 results • Page
1 of 1
Recent ...
Replies
Comment: using limma trend workflow in CAMERA
by
Gordon Smyth
53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results
by
Tikaaa2sahaaaq2c
• 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA
by
A.Barden
▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available
by
Tikaaa2sahaaaq2c
• 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Comment: Error message that there is no package called Biobase
by
DamionLedner99
• 0
thanks for sharing!!! https://cran.r-project.org/
Votes
Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2
Comment: Are transformed values from rlog /vst log2 normalized counts?
Answer: Are transformed values from rlog /vst log2 normalized counts?
A: DESeq2 normalization vs VST vs rlog
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
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Michael Love
43k
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fl
▴ 20
Popular Question
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James W. MacDonald
68k
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rcavalca
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James Aiden
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