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Showing :
boxplot
•
reset
2
votes
6
replies
1.8k
views
How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
7 months ago
Chris
▴ 20
0
votes
1
reply
717
views
How to add pvalue to boxplot?
boxplot
ggplot2
updated 21 months ago by
ATpoint
★ 4.5k • written 21 months ago by
Sooni
▴ 10
0
votes
5
replies
988
views
knitr error in sort.int - unable to knit a chunk with boxplot codes
knitr
boxplot
updated 4.8 years ago by
James W. MacDonald
67k • written 4.8 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.2k
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
4.9 years ago
l154359
• 0
2
votes
3
replies
1.7k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 5.4 years ago by
Wei Shi
★ 3.6k • written 5.4 years ago by
Raito92
▴ 60
0
votes
0
replies
849
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
5.6 years ago
pratikshasharma47
• 0
1
vote
1
reply
800
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
5.6 years ago
pratikshasharma47
• 0
2
votes
2
replies
798
views
Boxplot object (from the RNASeqGeneEdgeRQL workflow) returning a blank file...
boxplot
software error
updated 5.6 years ago by
Gordon Smyth
51k • written 5.6 years ago by
Raito92
▴ 60
7
votes
11
replies
5.4k
views
Comparing means of VST tranformed RNA-Seq counts in different groups of samples with boxplots
VST
deseq2
boxplot
rnaseq
updated 6.5 years ago by
Michael Love
42k • written 6.5 years ago by
Konstantinos Yeles
▴ 80
0
votes
2
replies
1.1k
views
understanding the meaning boxplot
boxplot
updated 7.7 years ago by
Peter Langfelder
★ 3.0k • written 7.7 years ago by
farahqureshi5
• 0
0
votes
4
replies
4.8k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 7.7 years ago by
James W. MacDonald
67k • written 7.7 years ago by
Javier Pérez Florido
▴ 840
1
vote
4
replies
2.2k
views
EdgeR differentially expressed genes vs normal boxplot visualization
edgeR
boxplot
7.8 years ago
snowru
• 0
3
votes
10
replies
2.3k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 8.5 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.6 years ago by
enricoferrero
▴ 660
1
vote
8
replies
2.0k
views
boxplot, microarray, hugene 2.0 st
boxplot
microarray
pd.hugene.2.0.st
9.6 years ago
kanacska
▴ 10
0
votes
2
replies
1.3k
views
boxplot on an Rle object?
Rle
boxplot
9.8 years ago
Johannes Rainer
★ 2.1k
15 results • Page
1 of 1
Recent ...
Replies
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
dseauer
• 0
Thank you so much for all of your help! I really appreciate it!
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
Gordon Smyth
51k
Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …
Comment: Limma- Print-tip loess normalisation-printer layout information does not match M
by
dseauer
• 0
Thank you so much for your reply! I am sincerely sorry- of course I do not have multiple GAL files- just one- I meant gpr files! I am so so…
Comment: Is it possible to parallelise saveHDF5SummarizedExperiment
by
Stefano Mangiola
▴ 20
Thansk Herve', I will try. For reference this is the parallelization implementation of zellkonverter, to save anndata from SCE https://gi…
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
by
Jason
• 0
Any update on the resolution to this? I'm having the same issue with another species.
Votes
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
biomaRt rnorvegicus_gene_ensembl not available anymore
A: Does edgeR need to specify reference group?
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