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boxplot
•
reset
2
votes
6
replies
4.4k
views
How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
20 months ago
Chris
▴ 20
0
votes
1
reply
972
views
How to add pvalue to boxplot?
boxplot
ggplot2
updated 2.9 years ago by
ATpoint
★ 5.0k • written 2.9 years ago by
Sooni
▴ 10
0
votes
5
replies
1.3k
views
knitr error in sort.int - unable to knit a chunk with boxplot codes
knitr
boxplot
updated 5.9 years ago by
James W. MacDonald
68k • written 5.9 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
1.5k
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
6.0 years ago
l154359
• 0
2
votes
3
replies
2.2k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 6.5 years ago by
Wei Shi
★ 3.6k • written 6.5 years ago by
Raito92
▴ 60
0
votes
0
replies
1.1k
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
6.7 years ago
pratikshasharma47
• 0
1
vote
1
reply
1.1k
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
6.7 years ago
pratikshasharma47
• 0
2
votes
2
replies
1.1k
views
Boxplot object (from the RNASeqGeneEdgeRQL workflow) returning a blank file...
boxplot
software error
updated 6.7 years ago by
Gordon Smyth
53k • written 6.7 years ago by
Raito92
▴ 60
7
votes
11
replies
6.3k
views
Comparing means of VST tranformed RNA-Seq counts in different groups of samples with boxplots
VST
deseq2
boxplot
rnaseq
updated 7.6 years ago by
Michael Love
43k • written 7.6 years ago by
Konstantinos Yeles
▴ 90
0
votes
2
replies
1.4k
views
understanding the meaning boxplot
boxplot
updated 8.8 years ago by
Peter Langfelder
★ 3.0k • written 8.8 years ago by
farahqureshi5
• 0
0
votes
4
replies
5.3k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
Javier Pérez Florido
▴ 840
1
vote
4
replies
2.7k
views
EdgeR differentially expressed genes vs normal boxplot visualization
edgeR
boxplot
8.9 years ago
snowru
• 0
3
votes
10
replies
2.8k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 9.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.7 years ago by
enricoferrero
▴ 680
1
vote
8
replies
2.6k
views
boxplot, microarray, hugene 2.0 st
boxplot
microarray
pd.hugene.2.0.st
10.7 years ago
kanacska
▴ 10
0
votes
2
replies
1.5k
views
boxplot on an Rle object?
Rle
boxplot
10.9 years ago
Johannes Rainer
★ 2.1k
15 results • Page
1 of 1
Recent ...
Replies
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
• 0
Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…
Answer: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
53k
The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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